Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24p13
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006006-1|AAH06006.1| 115|Homo sapiens chromosome 17 open read... 34 0.52
AY508814-1|AAR92035.1| 115|Homo sapiens C35 protein protein. 34 0.52
AF490253-1|AAO85461.1| 115|Homo sapiens XTP4 protein. 34 0.52
CR457154-1|CAG33435.1| 137|Homo sapiens SELT protein. 31 4.8
BC071699-1|AAH71699.1| 195|Homo sapiens selenoprotein T protein. 31 4.8
BC036738-1|AAH36738.3| 195|Homo sapiens selenoprotein T protein. 31 4.8
BC026350-1|AAH26350.2| 195|Homo sapiens selenoprotein T protein. 31 4.8
BC009611-1|AAH09611.2| 195|Homo sapiens selenoprotein T protein. 31 4.8
BC009556-1|AAH09556.2| 195|Homo sapiens selenoprotein T protein. 31 4.8
BC008411-1|AAH08411.2| 195|Homo sapiens selenoprotein T protein. 31 4.8
BC006012-1|AAH06012.2| 195|Homo sapiens selenoprotein T protein. 31 4.8
AY358096-1|AAQ88463.1| 137|Homo sapiens SELT protein. 31 4.8
AY358095-1|AAQ88462.1| 137|Homo sapiens SELT protein. 31 4.8
AF195141-1|AAF13696.1| 163|Homo sapiens selenoprotein T protein. 31 4.8
AF131856-1|AAD20063.1| 137|Homo sapiens Unknown protein. 31 4.8
>BC006006-1|AAH06006.1| 115|Homo sapiens chromosome 17 open reading
frame 37 protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.52
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +2
Query: 98 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSKGQEPREIKGEQP 241
G+FE+ +N +L++SKL+ P ++ + + S G+ +I +P
Sbjct: 63 GAFEIEINGQLVFSKLENGGFPYEKDLIEAIRRASNGETLEKITNSRP 110
>AY508814-1|AAR92035.1| 115|Homo sapiens C35 protein protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.52
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +2
Query: 98 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSKGQEPREIKGEQP 241
G+FE+ +N +L++SKL+ P ++ + + S G+ +I +P
Sbjct: 63 GAFEIEINGQLVFSKLENGGFPYEKDLIEAIRRASNGETLEKITNSRP 110
>AF490253-1|AAO85461.1| 115|Homo sapiens XTP4 protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.52
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +2
Query: 98 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSKGQEPREIKGEQP 241
G+FE+ +N +L++SKL+ P ++ + + S G+ +I +P
Sbjct: 63 GAFEIEINGQLVFSKLENGGFPYEKDLIEAIRRASNGETLEKITNSRP 110
>CR457154-1|CAG33435.1| 137|Homo sapiens SELT protein.
Length = 137
Score = 30.7 bits (66), Expect = 4.8
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 98 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 205
G+FE+ +ND ++SKL++ LP ++ Q++ + K
Sbjct: 89 GAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 124
>BC071699-1|AAH71699.1| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 30.7 bits (66), Expect = 4.8
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 98 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 205
G+FE+ +ND ++SKL++ LP ++ Q++ + K
Sbjct: 147 GAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 182
>BC036738-1|AAH36738.3| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 30.7 bits (66), Expect = 4.8
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 98 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 205
G+FE+ +ND ++SKL++ LP ++ Q++ + K
Sbjct: 147 GAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 182
>BC026350-1|AAH26350.2| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 30.7 bits (66), Expect = 4.8
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 98 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 205
G+FE+ +ND ++SKL++ LP ++ Q++ + K
Sbjct: 147 GAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 182
>BC009611-1|AAH09611.2| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 30.7 bits (66), Expect = 4.8
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 98 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 205
G+FE+ +ND ++SKL++ LP ++ Q++ + K
Sbjct: 147 GAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 182
>BC009556-1|AAH09556.2| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 30.7 bits (66), Expect = 4.8
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 98 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 205
G+FE+ +ND ++SKL++ LP ++ Q++ + K
Sbjct: 147 GAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 182
>BC008411-1|AAH08411.2| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 30.7 bits (66), Expect = 4.8
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 98 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 205
G+FE+ +ND ++SKL++ LP ++ Q++ + K
Sbjct: 147 GAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 182
>BC006012-1|AAH06012.2| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 30.7 bits (66), Expect = 4.8
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 98 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 205
G+FE+ +ND ++SKL++ LP ++ Q++ + K
Sbjct: 147 GAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 182
>AY358096-1|AAQ88463.1| 137|Homo sapiens SELT protein.
Length = 137
Score = 30.7 bits (66), Expect = 4.8
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 98 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 205
G+FE+ +ND ++SKL++ LP ++ Q++ + K
Sbjct: 89 GAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 124
>AY358095-1|AAQ88462.1| 137|Homo sapiens SELT protein.
Length = 137
Score = 30.7 bits (66), Expect = 4.8
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 98 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 205
G+FE+ +ND ++SKL++ LP ++ Q++ + K
Sbjct: 89 GAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 124
>AF195141-1|AAF13696.1| 163|Homo sapiens selenoprotein T protein.
Length = 163
Score = 30.7 bits (66), Expect = 4.8
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 98 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 205
G+FE+ +ND ++SKL++ LP ++ Q++ + K
Sbjct: 115 GAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 150
>AF131856-1|AAD20063.1| 137|Homo sapiens Unknown protein.
Length = 137
Score = 30.7 bits (66), Expect = 4.8
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 98 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSK 205
G+FE+ +ND ++SKL++ LP ++ Q++ + K
Sbjct: 89 GAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMK 124
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,675,382
Number of Sequences: 237096
Number of extensions: 1681303
Number of successful extensions: 2517
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2517
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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