Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24p05
         (116 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80843-18|AAN63439.1|  289|Caenorhabditis elegans Hypothetical p...    25   9.9  
U80843-17|AAK71358.1|  444|Caenorhabditis elegans Hypothetical p...    25   9.9  
AL117195-1|CAB60764.2|  368|Caenorhabditis elegans Hypothetical ...    25   9.9  

>U80843-18|AAN63439.1|  289|Caenorhabditis elegans Hypothetical
           protein C32B5.1b protein.
          Length = 289

 Score = 24.6 bits (51), Expect = 9.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 66  VXNFPKYIMKTRPRVVRHNTDL 1
           +  FP+YI K   R+VR + DL
Sbjct: 204 INGFPQYIHKISTRIVRVHLDL 225


>U80843-17|AAK71358.1|  444|Caenorhabditis elegans Hypothetical
           protein C32B5.1a protein.
          Length = 444

 Score = 24.6 bits (51), Expect = 9.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 66  VXNFPKYIMKTRPRVVRHNTDL 1
           +  FP+YI K   R+VR + DL
Sbjct: 320 INGFPQYIHKISTRIVRVHLDL 341


>AL117195-1|CAB60764.2|  368|Caenorhabditis elegans Hypothetical
           protein Y57A10A.2 protein.
          Length = 368

 Score = 24.6 bits (51), Expect = 9.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 19  YYPRSCFHYVLRKIXNKFXNHRIGRR 96
           Y P S FH+ +  + +KF N+ I  R
Sbjct: 48  YGPYSRFHFKIAPVIDKFHNYSIETR 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,305,356
Number of Sequences: 27780
Number of extensions: 19920
Number of successful extensions: 66
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 12,740,198
effective HSP length: 19
effective length of database: 12,212,378
effective search space used: 232035182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)