Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24o24
         (568 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075545-1|AAL68352.1|  384|Drosophila melanogaster RH43215p pro...    31   0.82 
AY095086-1|AAM11414.1|  330|Drosophila melanogaster RE56341p pro...    31   1.4  
AE014296-2391|AAF49733.1|  330|Drosophila melanogaster CG9238-PA...    31   1.4  
AE014296-2390|AAF49732.1|  384|Drosophila melanogaster CG9238-PB...    31   1.4  
BT025148-1|ABE73318.1|  270|Drosophila melanogaster IP04354p pro...    27   1.5  

>AY075545-1|AAL68352.1|  384|Drosophila melanogaster RH43215p
           protein.
          Length = 384

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -3

Query: 440 KAISFVLSTKILKTEYWLN*MERNFITNTMLFHYYNNMCNYDK 312
           K + F +  +  +TEYW N   +N+  +     YYN +  YDK
Sbjct: 306 KRLEFCICYRTNETEYWDNNDNKNYTISKRSPFYYNALSPYDK 348


>AY095086-1|AAM11414.1|  330|Drosophila melanogaster RE56341p
           protein.
          Length = 330

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -3

Query: 440 KAISFVLSTKILKTEYWLN*MERNFITNTMLFHYYNNMCNYDK 312
           K + F +  +  +TEYW N   +N+  +     YYN +  YDK
Sbjct: 252 KRLEFCICYRTNETEYWDNNDGKNYTISKRSPFYYNALSPYDK 294


>AE014296-2391|AAF49733.1|  330|Drosophila melanogaster CG9238-PA,
           isoform A protein.
          Length = 330

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -3

Query: 440 KAISFVLSTKILKTEYWLN*MERNFITNTMLFHYYNNMCNYDK 312
           K + F +  +  +TEYW N   +N+  +     YYN +  YDK
Sbjct: 252 KRLEFCICYRTNETEYWDNNDGKNYTISKRSPFYYNALSPYDK 294


>AE014296-2390|AAF49732.1|  384|Drosophila melanogaster CG9238-PB,
           isoform B protein.
          Length = 384

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -3

Query: 440 KAISFVLSTKILKTEYWLN*MERNFITNTMLFHYYNNMCNYDK 312
           K + F +  +  +TEYW N   +N+  +     YYN +  YDK
Sbjct: 306 KRLEFCICYRTNETEYWDNNDGKNYTISKRSPFYYNALSPYDK 348


>BT025148-1|ABE73318.1|  270|Drosophila melanogaster IP04354p
           protein.
          Length = 270

 Score = 27.5 bits (58), Expect(2) = 1.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 138 YSCAICCFCC 109
           YSC  CC+CC
Sbjct: 6   YSCCCCCYCC 15



 Score = 21.8 bits (44), Expect(2) = 1.5
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = -2

Query: 132 CAICCFCCVFQMLQC 88
           C  CC CC     +C
Sbjct: 17  CTCCCCCCCSCCCRC 31


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,240,871
Number of Sequences: 53049
Number of extensions: 399232
Number of successful extensions: 1048
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)