BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24o24
(568 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 25 0.40
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 25 0.40
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 24 0.93
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 24 1.2
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 1.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 1.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 1.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 1.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 1.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 1.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 1.6
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 1.6
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 1.6
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 1.6
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 1.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 1.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 1.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 1.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 1.6
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 2.1
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.1
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 2.8
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 3.7
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 4.9
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 6.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 6.5
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 6.5
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 6.5
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 8.6
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.40
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +2
Query: 275 VDALCNQVN*IQVYRNYTY---YCNNEKALYLL*NYV 376
+ +L N N Y N Y YCNN K LY NY+
Sbjct: 82 ISSLSNNYN----YNNNNYKKLYCNNYKKLYYNINYI 114
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.40
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +2
Query: 275 VDALCNQVN*IQVYRNYTY---YCNNEKALYLL*NYV 376
+ +L N N Y N Y YCNN K LY NY+
Sbjct: 82 ISSLSNNYN----YNNNNYKKLYCNNYKKLYYNINYI 114
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 0.93
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +2
Query: 275 VDALCNQVN*IQVYRNYTY---YCNNEKALYLL*NYV 376
+ +L N N Y N Y YCNN + LY NY+
Sbjct: 82 ISSLSNNYN----YNNNNYKKLYCNNYRKLYYNINYI 114
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 223 IDKEDNVFEMAQCEPISGRRP 285
+++ +N+FE+ EPI RP
Sbjct: 262 LNRTNNIFELVTVEPILTERP 282
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/36 (22%), Positives = 19/36 (52%)
Frame = +3
Query: 30 KQKQHSKYVI*LIPYKNRFHTATFEKHNKNNKSHNY 137
++++ SK + N ++ + + +N NN +NY
Sbjct: 71 RERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNY 106
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/36 (22%), Positives = 19/36 (52%)
Frame = +3
Query: 30 KQKQHSKYVI*LIPYKNRFHTATFEKHNKNNKSHNY 137
++++ SK + N ++ + + +N NN +NY
Sbjct: 71 RERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNY 106
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/36 (22%), Positives = 19/36 (52%)
Frame = +3
Query: 30 KQKQHSKYVI*LIPYKNRFHTATFEKHNKNNKSHNY 137
++++ SK + N ++ + + +N NN +NY
Sbjct: 71 RERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNY 106
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/36 (22%), Positives = 19/36 (52%)
Frame = +3
Query: 30 KQKQHSKYVI*LIPYKNRFHTATFEKHNKNNKSHNY 137
++++ SK + N ++ + + +N NN +NY
Sbjct: 71 RERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNY 106
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/36 (22%), Positives = 19/36 (52%)
Frame = +3
Query: 30 KQKQHSKYVI*LIPYKNRFHTATFEKHNKNNKSHNY 137
++++ SK + N ++ + + +N NN +NY
Sbjct: 71 RERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNY 106
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/36 (22%), Positives = 19/36 (52%)
Frame = +3
Query: 30 KQKQHSKYVI*LIPYKNRFHTATFEKHNKNNKSHNY 137
++++ SK + N ++ + + +N NN +NY
Sbjct: 71 RERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNY 106
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/36 (22%), Positives = 19/36 (52%)
Frame = +3
Query: 30 KQKQHSKYVI*LIPYKNRFHTATFEKHNKNNKSHNY 137
++++ SK + N ++ + + +N NN +NY
Sbjct: 71 RERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNY 106
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 320 NYTYYCNNEKALYLL*NYV 376
NY Y NN K LY NY+
Sbjct: 90 NYNNYNNNYKPLYYNINYI 108
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 320 NYTYYCNNEKALYLL*NYV 376
NY Y NN K LY NY+
Sbjct: 90 NYNNYNNNYKPLYYNINYI 108
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 320 NYTYYCNNEKALYLL*NYV 376
NY Y NN K LY NY+
Sbjct: 90 NYNNYNNNYKPLYYNINYI 108
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 320 NYTYYCNNEKALYLL*NYV 376
NY Y NN K LY NY+
Sbjct: 90 NYNNYNNNYKPLYYNINYI 108
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 320 NYTYYCNNEKALYLL*NYV 376
NY Y NN K LY NY+
Sbjct: 323 NYNNYNNNYKPLYYNINYI 341
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 320 NYTYYCNNEKALYLL*NYV 376
NY Y NN K LY NY+
Sbjct: 323 NYNNYNNNYKPLYYNINYI 341
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 320 NYTYYCNNEKALYLL*NYV 376
NY Y NN K LY NY+
Sbjct: 323 NYNNYNNNYKPLYYNINYI 341
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 320 NYTYYCNNEKALYLL*NYV 376
NY Y NN K LY NY+
Sbjct: 312 NYNNYNNNYKPLYYNINYI 330
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/36 (22%), Positives = 19/36 (52%)
Frame = +3
Query: 30 KQKQHSKYVI*LIPYKNRFHTATFEKHNKNNKSHNY 137
++++ SK + N ++ + + +N NN +NY
Sbjct: 71 RERERSKEPKIVSSLSNNYNYSNYNNYNNNNNYNNY 106
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 2.1
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = -2
Query: 132 CAICCFCCVFQMLQCEI 82
C C CC F CE+
Sbjct: 743 CFALCHCCDFDACDCEM 759
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 2.8
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +2
Query: 248 RWRSVNQFQVDALCNQVN*IQVYRNYTYYCNNEKALYLL*NYV 376
R RS + +L N N Y N Y NN K LY NY+
Sbjct: 295 RERSKEPKIISSLSNSCN----YSNNYYNNNNYKKLYYNINYI 333
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 470 IIVQWAFL*LKAISFVLSTKILKTEY 393
I+ W + AI F + TK+ EY
Sbjct: 162 ILAAWLIALISAIPFAIYTKVNLVEY 187
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 4.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 317 RNYTYYCNNEKAL 355
+NYT +C+ EK L
Sbjct: 448 KNYTKFCSTEKRL 460
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.4 bits (43), Expect = 6.5
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = -3
Query: 494 KSVNRQVPIIVQWAF 450
+S+N+ +PI+ +W F
Sbjct: 25 ESLNKSLPILHEWKF 39
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 320 NYTYYCNNEKALYLL*NYV 376
NY Y NN K L+ NY+
Sbjct: 323 NYNNYNNNYKPLHYNINYI 341
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.4 bits (43), Expect = 6.5
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = -3
Query: 494 KSVNRQVPIIVQWAF 450
+S+N+ +PI+ +W F
Sbjct: 25 ESLNKSLPILHEWKF 39
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.4 bits (43), Expect = 6.5
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = -3
Query: 494 KSVNRQVPIIVQWAF 450
+S+N+ +PI+ +W F
Sbjct: 25 ESLNKSLPILHEWKF 39
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 365 ITNTMLFHYYNNMCNYDKL 309
+T T L N C YDK+
Sbjct: 8 MTQTELLQELTNDCRYDKM 26
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,481
Number of Sequences: 438
Number of extensions: 3044
Number of successful extensions: 29
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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