Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24o23
         (295 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CU457740-3|CAM36333.1|  367|Caenorhabditis elegans Hypothetical ...    31   0.14 
Z81066-1|CAB02970.1|  919|Caenorhabditis elegans Hypothetical pr...    27   1.8  
U40797-8|AAL08029.1|  332|Caenorhabditis elegans Serpentine rece...    27   1.8  
Z78059-2|CAH04726.2|  538|Caenorhabditis elegans Hypothetical pr...    27   2.3  
Z71178-13|CAF31498.1|  342|Caenorhabditis elegans Hypothetical p...    27   3.1  
Z71178-11|CAA94885.2|  309|Caenorhabditis elegans Hypothetical p...    27   3.1  
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr...    27   3.1  
Z98851-5|CAB11541.1|  596|Caenorhabditis elegans Hypothetical pr...    26   4.1  
Z98851-4|CAB11542.1|  607|Caenorhabditis elegans Hypothetical pr...    26   4.1  
Z98877-2|CAB11570.1|  907|Caenorhabditis elegans Hypothetical pr...    26   5.4  
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass...    26   5.4  
AF101305-3|AAF98595.1|  341|Caenorhabditis elegans Serpentine re...    26   5.4  
Z92812-6|CAB07280.1|  372|Caenorhabditis elegans Hypothetical pr...    25   7.1  
U00033-11|AAC48296.1|  200|Caenorhabditis elegans Hypothetical p...    25   7.1  
Z93375-2|CAB07564.2|  359|Caenorhabditis elegans Hypothetical pr...    25   9.4  
Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical pr...    25   9.4  
U55370-1|AAA97993.3|  313|Caenorhabditis elegans Serpentine rece...    25   9.4  
U53332-4|ABS83852.1|  215|Caenorhabditis elegans Hypothetical pr...    25   9.4  
U53332-3|ABS83853.1|  218|Caenorhabditis elegans Hypothetical pr...    25   9.4  
AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin syntha...    25   9.4  
AF100659-3|AAC68969.2|  334|Caenorhabditis elegans Serpentine re...    25   9.4  

>CU457740-3|CAM36333.1|  367|Caenorhabditis elegans Hypothetical
           protein C50E10.3 protein.
          Length = 367

 Score = 31.1 bits (67), Expect = 0.14
 Identities = 13/62 (20%), Positives = 33/62 (53%)
 Frame = -2

Query: 267 IYFLYVLRELYEECYYLHLAFCNIYSFLYLLNILFIIHKSTFATVVHLILNTLLHLKVIN 88
           +Y L+++  L+++   L + +   Y+ +  +N+L  +    F  ++  + N   +LK++N
Sbjct: 165 LYLLFLII-LFQQFMVLSIVYLLTYNLMKFINVLIFLIAMNFLPMLIFLGNRWFNLKIVN 223

Query: 87  RF 82
            F
Sbjct: 224 EF 225


>Z81066-1|CAB02970.1|  919|Caenorhabditis elegans Hypothetical
           protein F17B5.2 protein.
          Length = 919

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = -2

Query: 231 ECYYLHLAFCNI---YSFLYLLNILFIIHKSTFATVVHLILNT 112
           E +YLHL+  NI      L+LLN++ +I+K      VHL  N+
Sbjct: 352 EKWYLHLSLTNIGVLVVTLFLLNVI-VINKDDILDRVHLRTNS 393


>U40797-8|AAL08029.1|  332|Caenorhabditis elegans Serpentine
           receptor, class u protein7 protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = -2

Query: 225 YYLHLAFCNIYSFLYLLNILFIIHKSTFATVVHLILNTLLH----LKVINRFKAFKLTTQ 58
           +YL         F+ +L I+F+++ +T  ++++ +L   L       V N F  F  T +
Sbjct: 115 FYLDYLAMGFPFFMSVLKIMFLVYPNTHKSIINKLLRIALPCISIYPVFNTFFLFPATGE 174

Query: 57  C 55
           C
Sbjct: 175 C 175


>Z78059-2|CAH04726.2|  538|Caenorhabditis elegans Hypothetical
           protein C34B4.4 protein.
          Length = 538

 Score = 27.1 bits (57), Expect = 2.3
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +2

Query: 98  FKCNNVFSIKCTTVANVDLCMINKMFNKYKNE*ILQNAKCK**HS 232
           + C  ++  + T   N D C  NK+F  Y N  +L   +CK  H+
Sbjct: 4   YPCTLLWDDELTCYCNTDYCNSNKLF--YSNYTVLPVIECKQVHN 46


>Z71178-13|CAF31498.1|  342|Caenorhabditis elegans Hypothetical
           protein B0024.13b protein.
          Length = 342

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 240 LYEECYYLHLAFCNIYSFLYLLNILFIIHKSTFATVV 130
           L+E C YL L      +++Y   I+F+    TFA ++
Sbjct: 282 LFEICIYLSLFLVIPDAYVYRFIIMFVCINQTFAALI 318


>Z71178-11|CAA94885.2|  309|Caenorhabditis elegans Hypothetical
           protein B0024.13a protein.
          Length = 309

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 240 LYEECYYLHLAFCNIYSFLYLLNILFIIHKSTFATVV 130
           L+E C YL L      +++Y   I+F+    TFA ++
Sbjct: 249 LFEICIYLSLFLVIPDAYVYRFIIMFVCINQTFAALI 285


>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
           protein C05A9.1 protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = -3

Query: 290 FLTVTRIIFIFFMYY 246
           FL  TR IFIFF YY
Sbjct: 763 FLAFTRPIFIFFQYY 777


>Z98851-5|CAB11541.1|  596|Caenorhabditis elegans Hypothetical
           protein H12I19.5b protein.
          Length = 596

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -2

Query: 267 IYFLYVLRELYEECYYLHLAFCNIYSFLYLLNILFIIHKSTFATV 133
           + +L ++R L ++C+ L      ++SF+Y  + LF      F +V
Sbjct: 155 LIYLLIIRTLPQKCHILCFTILGLFSFMY--SKLFCTETEAFNSV 197


>Z98851-4|CAB11542.1|  607|Caenorhabditis elegans Hypothetical
           protein H12I19.5a protein.
          Length = 607

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -2

Query: 267 IYFLYVLRELYEECYYLHLAFCNIYSFLYLLNILFIIHKSTFATV 133
           + +L ++R L ++C+ L      ++SF+Y  + LF      F +V
Sbjct: 155 LIYLLIIRTLPQKCHILCFTILGLFSFMY--SKLFCTETEAFNSV 197


>Z98877-2|CAB11570.1|  907|Caenorhabditis elegans Hypothetical
           protein Y69H2.2 protein.
          Length = 907

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 104 CNNVFSIKCTTVANVD-LCMINKMFNKYK 187
           C N  +  CT    V+  C++N+ +NKYK
Sbjct: 339 CENPVASACTPNPCVNGTCVLNEQYNKYK 367


>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 163, isoform a protein.
          Length = 1112

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -2

Query: 258 LYVLRELYEECYYLHLAFCNIYSFLYLLNILFIIHKSTFAT--VVHL 124
           + +L+  Y  C Y+ L   N YS  +  N   +   +T +T  V+HL
Sbjct: 664 ILILQTSYLSCSYILLYLWNFYSLAFASNFKTMSDTATTSTTVVIHL 710


>AF101305-3|AAF98595.1|  341|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 1 protein.
          Length = 341

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 7/43 (16%)
 Frame = -2

Query: 204 CNIYSFLYL-------LNILFIIHKSTFATVVHLILNTLLHLK 97
           C IYSFL +        N   I H  T    +H+I+  +LH K
Sbjct: 36  CTIYSFLAIQKATKLHFNSKCIFHTLTIFAFIHMIVRIILHGK 78


>Z92812-6|CAB07280.1|  372|Caenorhabditis elegans Hypothetical
           protein T03E6.6 protein.
          Length = 372

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 11/48 (22%), Positives = 27/48 (56%)
 Frame = -2

Query: 261 FLYVLRELYEECYYLHLAFCNIYSFLYLLNILFIIHKSTFATVVHLIL 118
           +L ++ E+    + L+  FC +   + LLN L I H+  + + +++++
Sbjct: 40  WLKLVNEVARVLHNLNFIFCVVGLNINLLNCLVISHRKMWTSSINVLM 87


>U00033-11|AAC48296.1|  200|Caenorhabditis elegans Hypothetical
           protein F37C12.10 protein.
          Length = 200

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -2

Query: 240 LYEECYYLHLAFCNIYSFLYLLNILFIIHKSTFATVVHLILNTL 109
           L+E   + H    + ++ L +L I FII K+ F  +    L+ L
Sbjct: 38  LFETNNFFHRVVSSFFTVLSVLTIWFIIMKAGFIIIALCFLSLL 81


>Z93375-2|CAB07564.2|  359|Caenorhabditis elegans Hypothetical
           protein C38C6.4 protein.
          Length = 359

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 225 YYLHLAFCNIYSFLYLLNILFIIHKSTFAT 136
           +Y+ +A   I  F YLLN+   I    F+T
Sbjct: 37  FYIQIALIFIVLFYYLLNVYIDIKTCQFST 66


>Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical protein
            T25G3.2 protein.
          Length = 1322

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 62   VVSLKALNRLITFKCNNVFSIKCTTVANVDLCMINKMFNKYK 187
            V SL AL   +  K  NV SIK + + N     +N+M  +Y+
Sbjct: 1158 VNSLLALAIFLIQKHKNVLSIKFSPIKNFRWTKMNEMTGQYE 1199


>U55370-1|AAA97993.3|  313|Caenorhabditis elegans Serpentine
           receptor, class x protein77 protein.
          Length = 313

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
 Frame = -2

Query: 201 NIYSFLYLLNILFI----IHKSTFATVVH-LILNTLLHLKVINRFKAFKLT 64
           N  + +++L I++I    I +S +  +V  ++L T ++LKV N F++  L+
Sbjct: 61  NNVAIIFILTIVYIPAIIIGESIYHPMVETVLLTTAMNLKVYNEFQSIYLS 111


>U53332-4|ABS83852.1|  215|Caenorhabditis elegans Hypothetical
           protein F59G1.8a protein.
          Length = 215

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 171 ILFIIHKSTFATVVHLILNTLLHLKV 94
           IL   H++ F+T+ H  L  LLHL++
Sbjct: 186 ILSDAHETKFSTIAHSSLFPLLHLQL 211


>U53332-3|ABS83853.1|  218|Caenorhabditis elegans Hypothetical
           protein F59G1.8b protein.
          Length = 218

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 171 ILFIIHKSTFATVVHLILNTLLHLKV 94
           IL   H++ F+T+ H  L  LLHL++
Sbjct: 189 ILSDAHETKFSTIAHSSLFPLLHLQL 214


>AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin synthase 1
            protein.
          Length = 1322

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 62   VVSLKALNRLITFKCNNVFSIKCTTVANVDLCMINKMFNKYK 187
            V SL AL   +  K  NV SIK + + N     +N+M  +Y+
Sbjct: 1158 VNSLLALAIFLIQKHKNVLSIKFSPIKNFRWTKMNEMTGQYE 1199


>AF100659-3|AAC68969.2|  334|Caenorhabditis elegans Serpentine
           receptor, class z protein23 protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 290 FLTVTRIIFIFFMYYANYMR 231
           FL +  I+F F+MY  NY R
Sbjct: 26  FLVIYLILFPFYMYVFNYNR 45


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,340,186
Number of Sequences: 27780
Number of extensions: 88750
Number of successful extensions: 263
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 291481146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)