Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24o23
(295 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 24 0.45
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 1.0
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 1.0
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 4.2
AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein. 21 4.2
AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein. 21 4.2
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 20 5.5
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 20 5.5
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 20 7.3
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 20 7.3
DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein. 19 9.6
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 19 9.6
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 19 9.6
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.8 bits (49), Expect = 0.45
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 119 SIKCTTVANVDLCMINKMF 175
S KC V +++LCM ++F
Sbjct: 182 SCKCIYVQSINLCMAGRLF 200
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.6 bits (46), Expect = 1.0
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -2
Query: 201 NIYSFLYLLNILFIIHKSTFAT--VVHLILNTLLHLKVINRFKAFKLT 64
+IYSFL LN++F+ +++ + + + ++++N A KL+
Sbjct: 477 SIYSFLERLNLIFMSSSLQWSSTHTLDVAWRRKVTIEILNSLSATKLS 524
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.6 bits (46), Expect = 1.0
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -2
Query: 201 NIYSFLYLLNILFIIHKSTFAT--VVHLILNTLLHLKVINRFKAFKLT 64
+IYSFL LN++F+ +++ + + + ++++N A KL+
Sbjct: 515 SIYSFLERLNLIFMSSSLQWSSTHTLDVAWRRKVTIEILNSLSATKLS 562
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 20.6 bits (41), Expect = 4.2
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 180 NIKMNKYCKMLNVNNNIPHIIRVVHKENKYYSSY 281
N+KM++ ++ NNI I + +KY Y
Sbjct: 181 NLKMSRGSSVVTGMNNIETYIVNTNYSSKYMREY 214
>AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 20.6 bits (41), Expect = 4.2
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 50 QXHCVVSLKALNRLITF 100
Q HC + ALN +I F
Sbjct: 83 QAHCAGVITALNNVIDF 99
>AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 20.6 bits (41), Expect = 4.2
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 50 QXHCVVSLKALNRLITF 100
Q HC + ALN +I F
Sbjct: 83 QAHCAGVITALNNVIDF 99
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 20.2 bits (40), Expect = 5.5
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +2
Query: 116 FSIKCTTVANVDLCMIN 166
F + C+T + ++LC I+
Sbjct: 104 FDVMCSTASILNLCAIS 120
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 20.2 bits (40), Expect = 5.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 252 VLRELYEECYYLHLAFCNI 196
V +LYEE Y L A C++
Sbjct: 352 VQNKLYEETYALAPAGCDL 370
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 19.8 bits (39), Expect = 7.3
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 237 YEECYYLHLAFCNIYSFL 184
Y E + L FC IY+ L
Sbjct: 114 YYETWVLGPLFCQIYAML 131
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 19.8 bits (39), Expect = 7.3
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 237 YEECYYLHLAFCNIYSFL 184
Y E + L FC IY+ L
Sbjct: 80 YYETWVLGPLFCQIYAML 97
>DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein.
Length = 132
Score = 19.4 bits (38), Expect = 9.6
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 293 FFLTVTRIIFIFF 255
FF+ V +IF++F
Sbjct: 8 FFILVITLIFLYF 20
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 19.4 bits (38), Expect = 9.6
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 135 VVHLILNTLLHLKVI 91
V+ +I+N LLH +VI
Sbjct: 10 VLFVIINVLLHGQVI 24
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 19.4 bits (38), Expect = 9.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 237 YEECYYLHLAFCNIYSFLYLLNILFIIHKS 148
+EE Y+L++A + F + +L I H S
Sbjct: 232 WEEVYFLNMASVFMRIFNLICMMLLIGHWS 261
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,866
Number of Sequences: 438
Number of extensions: 1089
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5994288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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