Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24o22
         (471 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70853-1|AAB09143.2|  439|Caenorhabditis elegans Hypothetical pr...    31   0.55 
Z81521-1|CAB04226.1|  319|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U40416-1|AAA81410.2|  822|Caenorhabditis elegans Protein kinase ...    29   2.2  
AF403714-1|AAK97497.1|  822|Caenorhabditis elegans serine/threon...    29   2.2  
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr...    27   5.1  
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr...    27   5.1  
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr...    27   5.1  
CU457740-9|CAM36339.1|  357|Caenorhabditis elegans Hypothetical ...    27   6.8  
AL021492-4|CAA16384.1|  492|Caenorhabditis elegans Hypothetical ...    27   6.8  

>U70853-1|AAB09143.2|  439|Caenorhabditis elegans Hypothetical
           protein M01H9.2 protein.
          Length = 439

 Score = 30.7 bits (66), Expect = 0.55
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 343 PLRCSKSSAQLKPLSKYTKVRPFRMGTRNXVSAST 447
           P  C K  A+LKP SK TK  P     RN  + ST
Sbjct: 78  PRLCGKCYAKLKPDSKRTKTIPVTQFKRNPAATST 112


>Z81521-1|CAB04226.1|  319|Caenorhabditis elegans Hypothetical
           protein F32A11.1 protein.
          Length = 319

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 398 KSGPSEWERETWYPQVQRWPS 460
           + G   WER+TW   VQ +PS
Sbjct: 225 RRGVGVWERDTWVESVQSYPS 245


>U40416-1|AAA81410.2|  822|Caenorhabditis elegans Protein kinase
           protein 29 protein.
          Length = 822

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -1

Query: 351 TQRSKDDMLRTFYTLL--ISVIDXRKHFXKYSQQPFLQAHEMLY 226
           T RS DD +R+    L    VID  K      + PF ++HEM+Y
Sbjct: 715 TTRSIDDRVRSIVCTLPFTEVIDELKASLNILKIPFSESHEMVY 758


>AF403714-1|AAK97497.1|  822|Caenorhabditis elegans serine/threonine
           kinase KIN-29 protein.
          Length = 822

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -1

Query: 351 TQRSKDDMLRTFYTLL--ISVIDXRKHFXKYSQQPFLQAHEMLY 226
           T RS DD +R+    L    VID  K      + PF ++HEM+Y
Sbjct: 715 TTRSIDDRVRSIVCTLPFTEVIDELKASLNILKIPFSESHEMVY 758


>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical
           protein T25C12.3 protein.
          Length = 2103

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 306 TTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGN 422
           T Y+T V    STV++ Q  + I +A  IYK     +GN
Sbjct: 380 TNYKTLVVIIRSTVSMNQNLNAISSA--IYKELTSNDGN 416


>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical
           protein T25C12.3 protein.
          Length = 2103

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 306 TTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGN 422
           T Y+T V    STV++ Q  + I +A  IYK     +GN
Sbjct: 380 TNYKTLVVIIRSTVSMNQNLNAISSA--IYKELTSNDGN 416


>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical
           protein T25C12.3 protein.
          Length = 2103

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 306 TTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGN 422
           T Y+T V    STV++ Q  + I +A  IYK     +GN
Sbjct: 380 TNYKTLVVIIRSTVSMNQNLNAISSA--IYKELTSNDGN 416


>CU457740-9|CAM36339.1|  357|Caenorhabditis elegans Hypothetical
           protein C50E10.9 protein.
          Length = 357

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 130 ISFRFLSIKHQLY*RFWQPRLSDSMRENC 216
           I ++FL  K ++Y  FW  +L + ++ +C
Sbjct: 89  IGYKFLGDKSKIYHHFWTDKLEEMVQISC 117


>AL021492-4|CAA16384.1|  492|Caenorhabditis elegans Hypothetical
           protein Y45F10D.9 protein.
          Length = 492

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 204 HRIRKPGLPKPLIQLVFDAQKPKRNFELIXKT 109
           H I  PG P   I ++ DA+K   +FEL  KT
Sbjct: 122 HSIADPGKPTE-INIILDAEKNFCSFELFSKT 152


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,730,263
Number of Sequences: 27780
Number of extensions: 169591
Number of successful extensions: 480
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)