Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24o01
(659 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 38 0.007
10_08_0573 + 18872720-18872781,18873261-18873610,18873917-188743... 31 1.1
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 31 1.1
01_05_0653 - 23948911-23948937,23949031-23949141,23949361-239494... 31 1.1
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 1.4
07_03_1791 - 29552218-29552427,29552858-29553358,29560369-295604... 30 1.9
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 30 1.9
04_03_0752 + 19300584-19301273,19301335-19301723,19302861-19303539 29 2.5
04_03_0758 + 19322891-19323193,19323606-19323778,19324778-19326095 29 3.3
03_05_0825 - 27986393-27986767,27987541-27987625,27987936-279880... 29 3.3
01_06_1656 + 38946922-38947542,38947640-38947739,38948045-389481... 29 3.3
10_08_0928 + 21617977-21618157,21618260-21618378,21618653-216187... 29 4.3
12_02_0693 - 22207582-22207620,22208421-22208597,22209258-222093... 28 5.7
03_02_0492 - 8861472-8861517,8862672-8862781,8862889-8863059,886... 28 5.7
02_05_0142 - 26227792-26228346,26228486-26228608,26229824-262300... 28 5.7
11_04_0216 - 14954047-14956098 28 7.6
11_01_0605 + 4821363-4823246 28 7.6
>08_02_0499 - 17820615-17822516,17823224-17823373,17823491-17823568,
17823948-17824061,17824145-17824297,17826928-17827071,
17827162-17827516,17828574-17828741,17829522-17829751,
17829916-17830049,17830686-17830749
Length = 1163
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/101 (22%), Positives = 53/101 (52%)
Frame = +1
Query: 313 QYFEANTNKSRHHEQWTTEGYYERANKEAELLRQQKIRAAKLEERRQKLELMLFQENMQY 492
+Y + ++ HEQ + + + ++EL++QQ++ +++Q++ LM Q+ Q
Sbjct: 1009 KYSQLPSSGDTRHEQNKPQKLESQMDHQSELVQQQQVYF----QQQQQMYLMQQQQMYQQ 1064
Query: 493 QQELKNLSAQPKLYKNGSYLNKVPTSMLQDINQGIIEKEEQ 615
QQ+L+ Q +L + YL+++P Q + +++Q
Sbjct: 1065 QQQLQQQLLQQQLLQQQQYLSQMPQQQQNMTQQQQLFQQQQ 1105
>10_08_0573 +
18872720-18872781,18873261-18873610,18873917-18874334,
18875172-18877180,18877390-18877398,18880291-18880398,
18880399-18880469,18880769-18881785
Length = 1347
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 422 LGQRN*KKDAKNWSLCCSKKICSTNRNSRIFQRNLNYIKM-DHISTKFQH 568
LG R +KD W ++IC N N I R L+Y ++ H+ F +
Sbjct: 296 LGHRLHQKDKSKWVAILQEEICDANPNYFIRARQLSYAQLHSHLKPCFAY 345
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 394 EAELLRQQKIRAAKLEERRQKLELML-FQENMQYQQELKNLSAQPKLYKNGSYLNKVPTS 570
+AEL R++ + AKL E+ ++ E M+ F E + + + L+ + + + +Y N +
Sbjct: 4 QAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGAR 63
Query: 571 MLQDINQGIIEKEEQLRKHEAELRL 645
IE++E+ R +E + L
Sbjct: 64 RASWRIISSIEQKEESRGNEDRVTL 88
>01_05_0653 -
23948911-23948937,23949031-23949141,23949361-23949441,
23949865-23949984,23950088-23950252,23950344-23950493,
23950565-23950674,23951401-23951518,23951597-23951827,
23952345-23952524,23953639-23953908,23954930-23954979,
23955213-23955288,23955396-23955483,23956010-23956101,
23956200-23956529,23957484-23957593,23957810-23957907,
23959538-23959566
Length = 811
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 343 RHHEQWTTEGYYERANKEAELLRQQKIRAAKLEERRQKLEL--MLFQE--NMQYQQELKN 510
R H T Y E +AE +QQ+ + + + Q++++ ML Q Q QQ+ +
Sbjct: 68 REHSDVATS-YIETQQAKAEHQKQQQQQYHHQQHQHQQIQMQQMLLQRAAQQQQQQQQQQ 126
Query: 511 LSAQPKLYKNGSYL 552
Q +L+++GS+L
Sbjct: 127 QQQQQQLHRDGSHL 140
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 208 ENKMSRSKPQWHLQALAAQRRDNVLRRAEE--LQKVAQYFEANTNKSRHHEQ 357
E + +R K ++ Q ++ ++R+++ LQK Q A +SRHH+Q
Sbjct: 159 EERRARKKREYEKQRAEDRKNQQMMRQSQATVLQKTQQVRAAQQPQSRHHQQ 210
>07_03_1791 -
29552218-29552427,29552858-29553358,29560369-29560449,
29563783-29564015,29564976-29565042
Length = 363
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 259 AQRRDNVLRRAEELQKVAQYFEANTNKSRHHEQWTTEGYYE-RANKEAELLRQQKIRAAK 435
AQR + RRA+ L++ A+ + + HE+ E R +EA R + A K
Sbjct: 140 AQRAQELERRAKALEERARLLDQRESTLASHERTAAEAEASLRLCEEAAAERDRTTLAVK 199
Query: 436 LEERRQKLELMLFQE 480
R+ EL L +E
Sbjct: 200 ASAARRAKELWLREE 214
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 382 RANKEAELLRQQKIRAAKLEERRQKLELML-FQENMQYQQELKNLSAQPKLYKNGSYLNK 558
+ ++ AEL R++ + AKL E+ ++ E M+ F E + + + L+ + + + +Y N
Sbjct: 218 KMSQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNV 277
Query: 559 VPTSMLQDINQGIIEKEEQLRKHE 630
+ IE++E+ R +E
Sbjct: 278 IGARRASWRIISSIEQKEESRGNE 301
>04_03_0752 + 19300584-19301273,19301335-19301723,19302861-19303539
Length = 585
Score = 29.5 bits (63), Expect = 2.5
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Frame = +1
Query: 226 SKPQWHLQALAAQRRDNVLRRAEELQKVAQYFEANTNKS-----RHHEQWTTEGYY---E 381
+K + +Q R V+R AEE +K+ + KS R E+ E E
Sbjct: 383 AKDKSSVQEWDDDREAEVIRMAEEFEKLVLTYNVAVRKSGAGAARGEERLMVENLLLADE 442
Query: 382 RANKE--AELLRQQKIRAAKLE-ERRQKLELMLFQENMQYQQELK 507
+ E + L+RQQ+ + L+ +++Q+ E L ++ MQ QQ L+
Sbjct: 443 QRKSEHVSALVRQQQQQLVALQKQQQQQEEAALQRQRMQQQQALQ 487
>04_03_0758 + 19322891-19323193,19323606-19323778,19324778-19326095
Length = 597
Score = 29.1 bits (62), Expect = 3.3
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +1
Query: 262 QRRDNVLRRAE-ELQKVAQYFEANTNKSRHHEQWTTEGYYERANKEAELLRQQ-KIRAAK 435
+RR +V R ELQKV + + + R YERA A LLRQ+ ++ A
Sbjct: 377 ERRASVRERVRLELQKVVAFLQRRELEQR----------YERA---AALLRQRAQLEQAA 423
Query: 436 LEERRQKLELMLFQENMQYQQELKNLSAQPK 528
L+E + KLE+ + + +Q + L+ P+
Sbjct: 424 LQE-QLKLEMQQMRRRQEQRQRARELAIMPQ 453
>03_05_0825 -
27986393-27986767,27987541-27987625,27987936-27988036,
27988144-27988227,27988868-27988939,27989203-27989319,
27989386-27989526,27989951-27990122,27990324-27990372,
27990773-27990821,27991240-27991270,27991301-27991371
Length = 448
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/93 (21%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +1
Query: 262 QRRDNVLRRAEELQKVAQYFEANTNKSRHHEQWTTEGYYERA--NKEAELLRQQKIRAAK 435
Q+ D L E + ++ K+R + + E+A ++ +++ + ++ AAK
Sbjct: 213 QQEDKKLSNTEAYMRRSEVQRKADQKAREESERLRQQEREQAIEKRKRDMMLRARV-AAK 271
Query: 436 LEERRQKLELMLFQENMQYQQELKNLSAQPKLY 534
EE+R +L M + E+ + +A+P +Y
Sbjct: 272 AEEKRLELLYMQWAEHHKKLSNFLRTTAEPPIY 304
>01_06_1656 +
38946922-38947542,38947640-38947739,38948045-38948189,
38948868-38948991,38949443-38949960,38950111-38950458,
38950557-38950638,38951309-38951707,38951790-38951927,
38952063-38952108,38952200-38952369
Length = 896
Score = 29.1 bits (62), Expect = 3.3
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 3/148 (2%)
Frame = +1
Query: 106 NDTYDLTYSNYGSLSSPTLCNNRLCDHCIKRG*TENKMSRSKPQWHLQALAAQRRDNVLR 285
NDT + + L T N + K+ E K + K + ++ ++++ LR
Sbjct: 310 NDTGIIENVDDSQLQKNTSTNEKDTQKAQKQVEKELKQ-KEKEEARMRKQQKKQQEEALR 368
Query: 286 RAEELQKVAQYFEANTNKS-RHHEQWTTEGYYERANKEAELLRQQKIR--AAKLEERRQK 456
+ +K EA K R E+ + R +EAE +QQK + A+ E++R++
Sbjct: 369 EQKRREKE----EAEMKKQQRKQEEEAQKEQKRREKEEAETRKQQKKQQEEAEKEQKRRE 424
Query: 457 LELMLFQENMQYQQELKNLSAQPKLYKN 540
E + ++ + Q K S + +KN
Sbjct: 425 KEAVQLKKQLAIQ---KQASMMERFFKN 449
>10_08_0928 +
21617977-21618157,21618260-21618378,21618653-21618774,
21618853-21619049,21619350-21619603,21619779-21619880,
21619976-21620404,21620611-21621369,21621586-21621771
Length = 782
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 241 HLQALAAQRRDNVLRRAEELQKVAQYFEANTNKSRHHEQWTTEGYYERANKEAELLRQQ- 417
H+ LAA+R + R +E ++ + E + + + R E L++Q
Sbjct: 325 HVTDLAAKRAEEEARLSEVYSRINRVNEQAHQEKEQLNALEAQCRHVRDLARKEALQKQI 384
Query: 418 -KIRAAKLEERRQKLELMLFQENMQY 492
++R +K ++ Q+LE +L + M Y
Sbjct: 385 LQLRTSKEADKMQRLEKLLELDGMSY 410
>12_02_0693 -
22207582-22207620,22208421-22208597,22209258-22209347,
22210215-22210280,22210473-22210570,22210669-22210789,
22210875-22212477,22213332-22213915
Length = 925
Score = 28.3 bits (60), Expect = 5.7
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +1
Query: 268 RDNVLRRAEELQKVAQYFEANTN--KSRHHEQWTTEGYYERANKEAELLRQQKIRAAKLE 441
R+ +R+ EE ++ + E K R E+ + ERA KEA + RA
Sbjct: 530 REREMRQREEKEREQRRLEEERELEKQRERERAARQAV-ERATKEARERAAAEARAKAER 588
Query: 442 ERRQKLELMLFQENMQYQQELKNLSAQPK 528
E RQ+ E Q + +E + A+ +
Sbjct: 589 EARQRAERAAVQRAQKEARERAAVDARER 617
>03_02_0492 -
8861472-8861517,8862672-8862781,8862889-8863059,
8863158-8863262,8863342-8863431,8863719-8863813,
8863933-8864101,8864193-8864345,8864562-8864639,
8864883-8864957,8865076-8865098,8865181-8865268,
8865397-8865432
Length = 412
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/92 (22%), Positives = 44/92 (47%)
Frame = +1
Query: 379 ERANKEAELLRQQKIRAAKLEERRQKLELMLFQENMQYQQELKNLSAQPKLYKNGSYLNK 558
+R E++L + +LE RQKL + + ++ + ++ + SA Y+ +
Sbjct: 241 DREKLESQL-HDMALMVERLEGSRQKLLMEIDSQSSEIEKLFEENSALSTSYQEAVAVTM 299
Query: 559 VPTSMLQDINQGIIEKEEQLRKHEAELRLHHA 654
+ ++D +++ E+LR H +LRL A
Sbjct: 300 QWENQVKDC----LKQNEELRSHLEKLRLEQA 327
>02_05_0142 -
26227792-26228346,26228486-26228608,26229824-26230084,
26230658-26231116
Length = 465
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +1
Query: 328 NTNKSRHHEQWTTEGYYERANKEAELLRQQKIRAAKLEERRQKLELMLFQENMQYQQELK 507
N N + H+QW TE + + L++ AA+ E Q+L + F N L
Sbjct: 148 NPNSRQGHKQWLTEVQFLGVVEHPNLVKLIGYCAAQSERGPQRLLVYEFMSNKTLDDHLF 207
Query: 508 NLSAQPKL 531
N A P L
Sbjct: 208 N-KAYPVL 214
>11_04_0216 - 14954047-14956098
Length = 683
Score = 27.9 bits (59), Expect = 7.6
Identities = 25/115 (21%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = +1
Query: 295 ELQKVAQYFEANTNKSRHHEQWTTEGYYERANKEAELLRQQKIRAAKLEERRQKLELMLF 474
E++++A E+ H E+ + E EAE ++ + + EE +++
Sbjct: 344 EVEEIASVAESGM----HQEEQVFKDVKECVQSEAETCTEKCSKDQQSEE-----SVVVV 394
Query: 475 QENMQYQQE-LKNLSAQPKLYKNGSYLNKVPTSMLQDINQGIIEKEEQLRKHEAE 636
Q ++Q+E LK + +P++ ++ Y + P LQD ++ EE+ + E +
Sbjct: 395 QSEEEWQEENLKIVLPEPEM-QDQEYKDVEPVKELQDQEYKFLQPEEEEEQQEQD 448
>11_01_0605 + 4821363-4823246
Length = 627
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 79 DNLL*GSNFNDTYDLTYSNYGSLSSPTLCNNRL 177
D +L G+NF+D + YG+L+ LC N L
Sbjct: 206 DLVLSGNNFSDHIPMGLFRYGNLTLLDLCRNNL 238
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,992,684
Number of Sequences: 37544
Number of extensions: 310517
Number of successful extensions: 960
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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