Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24n24
         (317 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069790-1|AAL39935.1| 1047|Drosophila melanogaster SD03282p pro...    27   5.2  
AL009188-3|CAA15674.2| 1060|Drosophila melanogaster EG:165H7.3 p...    27   5.2  
AE014298-33|AAF45504.2| 1047|Drosophila melanogaster CG3923-PA p...    27   5.2  

>AY069790-1|AAL39935.1| 1047|Drosophila melanogaster SD03282p
           protein.
          Length = 1047

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 85  KTYFYSQIRKCVFGIKDLIHQEKPENFSVCQVTSEDHEAAV 207
           K YFYS I  CV  + DL+   K    +VC +  +D +  +
Sbjct: 170 KQYFYSCISMCVPDVLDLV--TKYLLIAVCHINGKDIQTTI 208


>AL009188-3|CAA15674.2| 1060|Drosophila melanogaster EG:165H7.3
           protein.
          Length = 1060

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 85  KTYFYSQIRKCVFGIKDLIHQEKPENFSVCQVTSEDHEAAV 207
           K YFYS I  CV  + DL+   K    +VC +  +D +  +
Sbjct: 183 KQYFYSCISMCVPDVLDLV--TKYLLIAVCHINGKDIQTTI 221


>AE014298-33|AAF45504.2| 1047|Drosophila melanogaster CG3923-PA
           protein.
          Length = 1047

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 85  KTYFYSQIRKCVFGIKDLIHQEKPENFSVCQVTSEDHEAAV 207
           K YFYS I  CV  + DL+   K    +VC +  +D +  +
Sbjct: 170 KQYFYSCISMCVPDVLDLV--TKYLLIAVCHINGKDIQTTI 208


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,855,993
Number of Sequences: 53049
Number of extensions: 226513
Number of successful extensions: 566
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)