Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24n24
         (317 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   2.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    20   6.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    20   6.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   8.3  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 160 NFSVCQVTSEDHEAAVDAIKRHFLSE 237
           +F +  VT  DH  A ++  +H+ +E
Sbjct: 351 SFQMKNVTIVDHHTASESFMKHYENE 376


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -1

Query: 140 IKSLIPNTHFLICE*KYV 87
           I+++IP+   LIC+ ++V
Sbjct: 328 IENVIPSNEELICDKRFV 345


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -1

Query: 140 IKSLIPNTHFLICE*KYV 87
           I+++IP+   LIC+ ++V
Sbjct: 343 IENVIPSNEELICDKRFV 360


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 283 HDRCSRSYF 257
           H RCSR +F
Sbjct: 18  HQRCSRDWF 26


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,527
Number of Sequences: 438
Number of extensions: 1233
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)