Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24n23
(606 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical pr... 253 6e-68
Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical pr... 253 6e-68
Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical pr... 253 6e-68
Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical pr... 253 6e-68
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 28 4.5
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 27 7.9
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 27 7.9
>Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical
protein C47E12.4d protein.
Length = 292
Score = 253 bits (620), Expect = 6e-68
Identities = 111/162 (68%), Positives = 134/162 (82%)
Frame = +2
Query: 107 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEIS 286
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+PRWTNAKME++
Sbjct: 10 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 69
Query: 287 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVD 466
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+D
Sbjct: 70 TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPID 129
Query: 467 VIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRD 592
VIE+G +VA RG V VK+LGTLALIDEGETDWKL+AID D
Sbjct: 130 VIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVND 171
>Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical
protein C47E12.4c protein.
Length = 406
Score = 253 bits (620), Expect = 6e-68
Identities = 111/162 (68%), Positives = 134/162 (82%)
Frame = +2
Query: 107 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEIS 286
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+PRWTNAKME++
Sbjct: 124 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 183
Query: 287 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVD 466
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+D
Sbjct: 184 TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPID 243
Query: 467 VIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRD 592
VIE+G +VA RG V VK+LGTLALIDEGETDWKL+AID D
Sbjct: 244 VIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVND 285
>Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical
protein C47E12.4b protein.
Length = 407
Score = 253 bits (620), Expect = 6e-68
Identities = 111/162 (68%), Positives = 134/162 (82%)
Frame = +2
Query: 107 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEIS 286
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+PRWTNAKME++
Sbjct: 125 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 184
Query: 287 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVD 466
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+D
Sbjct: 185 TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPID 244
Query: 467 VIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRD 592
VIE+G +VA RG V VK+LGTLALIDEGETDWKL+AID D
Sbjct: 245 VIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVND 286
>Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical
protein C47E12.4a protein.
Length = 338
Score = 253 bits (620), Expect = 6e-68
Identities = 111/162 (68%), Positives = 134/162 (82%)
Frame = +2
Query: 107 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEIS 286
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+PRWTNAKME++
Sbjct: 56 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 115
Query: 287 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVD 466
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+D
Sbjct: 116 TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPID 175
Query: 467 VIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRD 592
VIE+G +VA RG V VK+LGTLALIDEGETDWKL+AID D
Sbjct: 176 VIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVND 217
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 350 NVFPHRGYIWNYGALPQTWE-NPNHVDPD 433
N +P GYIWNY Q WE +P++V P+
Sbjct: 401 NAYP--GYIWNYET--QEWEYDPSYVAPE 425
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 271 ENGDQPRGGPQSYQAGRKERQPSVREQRLPSSRLHLELR 387
+N D GGP + + GRK++ S E S LH EL+
Sbjct: 83 KNSDGGAGGPPA-KRGRKKKAKSESEDEAESDHLHDELK 120
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +1
Query: 178 PYIAHARHSTMGRQSSTPRQHGSRST*MDQCENGDQPRGGPQSYQAGRKERQPSVREQ 351
P + TM SS+ H S++ ENG+ P + ++GRK ++ +Q
Sbjct: 697 PSTVPSSSQTMATTSSSFHHHSSQAGPSRDIENGEAPTATATTPKSGRKWKKSKAAKQ 754
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +1
Query: 178 PYIAHARHSTMGRQSSTPRQHGSRST*MDQCENGDQPRGGPQSYQAGRKERQPSVREQ 351
P + TM SS+ H S++ ENG+ P + ++GRK ++ +Q
Sbjct: 575 PSTVPSSSQTMATTSSSFHHHSSQAGPSRDIENGEAPTATATTPKSGRKWKKSKAAKQ 632
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,242,172
Number of Sequences: 27780
Number of extensions: 283828
Number of successful extensions: 751
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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