Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24n15
(592 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3035|AAM68389.2| 502|Drosophila melanogaster CG13425-P... 70 3e-12
AF275629-1|AAF78762.1| 508|Drosophila melanogaster bancal prote... 69 6e-12
AJ238947-1|CAB64936.1| 496|Drosophila melanogaster heterogeneou... 68 8e-12
AF142631-1|AAF00596.1| 490|Drosophila melanogaster hnRNP K prot... 68 8e-12
AE013599-3036|AAF57450.2| 496|Drosophila melanogaster CG13425-P... 68 8e-12
X96601-1|CAA65421.1| 962|Drosophila melanogaster vinculin protein. 31 0.88
AY128501-1|AAM75094.1| 961|Drosophila melanogaster SD03117p pro... 31 0.88
AL009193-4|CAA15691.1| 961|Drosophila melanogaster EG:103B4.1,F... 31 0.88
AE014298-363|AAF45752.1| 961|Drosophila melanogaster CG3299-PA ... 31 0.88
BT001365-1|AAN71120.1| 844|Drosophila melanogaster AT30147p pro... 31 1.5
AE014297-1809|AAN13596.1| 844|Drosophila melanogaster CG31533-P... 31 1.5
X73154-1|CAA51678.1| 2515|Drosophila melanogaster tenascin-like ... 28 8.2
AF008228-1|AAB88281.1| 2731|Drosophila melanogaster odd Oz prote... 28 8.2
AF008227-1|AAC05080.1| 2731|Drosophila melanogaster odd Oz produ... 28 8.2
AE014296-3669|AAF51824.2| 2731|Drosophila melanogaster CG5723-PB... 28 8.2
>AE013599-3035|AAM68389.2| 502|Drosophila melanogaster CG13425-PC,
isoform C protein.
Length = 502
Score = 69.7 bits (163), Expect = 3e-12
Identities = 42/115 (36%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Frame = +2
Query: 254 IKMKRDAYGD-DGPA-QKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITV 427
++MKR+ + +GP QKR+R+ ++ V LIPS +A +R+QYKA+++V
Sbjct: 5 LRMKREMNDEGEGPQDQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSV 64
Query: 428 PDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQ 592
D GPER + I+A+ + TL EII +++ E D++ DVR+LIHQ
Sbjct: 65 DDSQGPERTIQISADIESTL-EIITEMLKYFEE---------RDEDFDVRLLIHQ 109
>AF275629-1|AAF78762.1| 508|Drosophila melanogaster bancal protein
protein.
Length = 508
Score = 68.5 bits (160), Expect = 6e-12
Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Frame = +2
Query: 260 MKRDAYGD-DGPA-QKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPD 433
MKR+ + +GP QKR+R++++ V LIPS +A +R+QYKA+++V D
Sbjct: 1 MKREMNDEGEGPQDQKRNRRSEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD 60
Query: 434 CPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQ 592
GPER + I+A+ + TL EII +++ E D++ DVR+LIHQ
Sbjct: 61 SQGPERTIQISADIESTL-EIITEMLKYFEE---------RDEDFDVRLLIHQ 103
>AJ238947-1|CAB64936.1| 496|Drosophila melanogaster heterogeneous
nuclear ribonucleoprotein(hnRNP) protein.
Length = 496
Score = 68.1 bits (159), Expect = 8e-12
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Frame = +2
Query: 260 MKRDAYGD-DGPA-QKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPD 433
MKR+ + +GP QKR+R+ ++ V LIPS +A +R+QYKA+++V D
Sbjct: 1 MKREMNDEGEGPQDQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD 60
Query: 434 CPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQ 592
GPER + I+A+ + TL EII +++ E D++ DVR+LIHQ
Sbjct: 61 SQGPERTIQISADIESTL-EIITEMLKYFEE---------RDEDFDVRLLIHQ 103
>AF142631-1|AAF00596.1| 490|Drosophila melanogaster hnRNP K protein
homolog protein.
Length = 490
Score = 68.1 bits (159), Expect = 8e-12
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Frame = +2
Query: 260 MKRDAYGD-DGPA-QKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPD 433
MKR+ + +GP QKR+R+ ++ V LIPS +A +R+QYKA+++V D
Sbjct: 1 MKREMNDEGEGPQDQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD 60
Query: 434 CPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQ 592
GPER + I+A+ + TL EII +++ E D++ DVR+LIHQ
Sbjct: 61 SQGPERTIQISADIESTL-EIITEMLKYFEE---------RDEDFDVRLLIHQ 103
>AE013599-3036|AAF57450.2| 496|Drosophila melanogaster CG13425-PA,
isoform A protein.
Length = 496
Score = 68.1 bits (159), Expect = 8e-12
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Frame = +2
Query: 260 MKRDAYGD-DGPA-QKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPD 433
MKR+ + +GP QKR+R+ ++ V LIPS +A +R+QYKA+++V D
Sbjct: 1 MKREMNDEGEGPQDQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD 60
Query: 434 CPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQ 592
GPER + I+A+ + TL EII +++ E D++ DVR+LIHQ
Sbjct: 61 SQGPERTIQISADIESTL-EIITEMLKYFEE---------RDEDFDVRLLIHQ 103
>X96601-1|CAA65421.1| 962|Drosophila melanogaster vinculin protein.
Length = 962
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 479 ETLVEIIKDIMPCLAEFHNQGGSR 550
E LV+ +KD+ PCL++ H + G+R
Sbjct: 154 EQLVQFLKDLSPCLSKVHREVGAR 177
>AY128501-1|AAM75094.1| 961|Drosophila melanogaster SD03117p
protein.
Length = 961
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 479 ETLVEIIKDIMPCLAEFHNQGGSR 550
E LV+ +KD+ PCL++ H + G+R
Sbjct: 154 EQLVQFLKDLSPCLSKVHREVGAR 177
>AL009193-4|CAA15691.1| 961|Drosophila melanogaster
EG:103B4.1,FBgn0004397;Vinc protein.
Length = 961
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 479 ETLVEIIKDIMPCLAEFHNQGGSR 550
E LV+ +KD+ PCL++ H + G+R
Sbjct: 154 EQLVQFLKDLSPCLSKVHREVGAR 177
>AE014298-363|AAF45752.1| 961|Drosophila melanogaster CG3299-PA
protein.
Length = 961
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 479 ETLVEIIKDIMPCLAEFHNQGGSR 550
E LV+ +KD+ PCL++ H + G+R
Sbjct: 154 EQLVQFLKDLSPCLSKVHREVGAR 177
>BT001365-1|AAN71120.1| 844|Drosophila melanogaster AT30147p
protein.
Length = 844
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = -3
Query: 188 TKALKHKQYTFRYKNLVKSKLDLNIKTLKMAAT---IAKCKCHQIEINC 51
T +K K TFR +VKS + + ++ +K A KCKCHQ + C
Sbjct: 615 TLGMKQKPITFR---IVKSDMAVALRQIKRALKDQGFEKCKCHQSLMMC 660
>AE014297-1809|AAN13596.1| 844|Drosophila melanogaster CG31533-PA
protein.
Length = 844
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = -3
Query: 188 TKALKHKQYTFRYKNLVKSKLDLNIKTLKMAAT---IAKCKCHQIEINC 51
T +K K TFR +VKS + + ++ +K A KCKCHQ + C
Sbjct: 615 TLGMKQKPITFR---IVKSDMAVALRQIKRALKDQGFEKCKCHQSLMMC 660
>X73154-1|CAA51678.1| 2515|Drosophila melanogaster tenascin-like
protein protein.
Length = 2515
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 352 GWVDNRKRWQQYIKAQKPVQSLYNSPRLPRPRT 450
G + NR W+ +++ Q+P+Q+ S PRP T
Sbjct: 1531 GDLANRFEWRYFVRRQQPLQAGKQSKGPPRPVT 1563
>AF008228-1|AAB88281.1| 2731|Drosophila melanogaster odd Oz protein
protein.
Length = 2731
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 352 GWVDNRKRWQQYIKAQKPVQSLYNSPRLPRPRT 450
G + NR W+ +++ Q+P+Q+ S PRP T
Sbjct: 1747 GDLANRFEWRYFVRRQQPLQAGKQSKGPPRPVT 1779
>AF008227-1|AAC05080.1| 2731|Drosophila melanogaster odd Oz product
protein.
Length = 2731
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 352 GWVDNRKRWQQYIKAQKPVQSLYNSPRLPRPRT 450
G + NR W+ +++ Q+P+Q+ S PRP T
Sbjct: 1747 GDLANRFEWRYFVRRQQPLQAGKQSKGPPRPVT 1779
>AE014296-3669|AAF51824.2| 2731|Drosophila melanogaster CG5723-PB
protein.
Length = 2731
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 352 GWVDNRKRWQQYIKAQKPVQSLYNSPRLPRPRT 450
G + NR W+ +++ Q+P+Q+ S PRP T
Sbjct: 1747 GDLANRFEWRYFVRRQQPLQAGKQSKGPPRPVT 1779
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,609,266
Number of Sequences: 53049
Number of extensions: 519153
Number of successful extensions: 1227
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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