Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24n14
         (624 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC132669-1|AAI32670.1|  703|Homo sapiens DEAH (Asp-Glu-Ala-His) ...    30   7.6  
AL023803-3|CAI22034.1|  679|Homo sapiens DEAH (Asp-Glu-Ala-His) ...    30   7.6  
AL023803-2|CAI22035.1|  703|Homo sapiens DEAH (Asp-Glu-Ala-His) ...    30   7.6  
AK026412-1|BAB15476.1|  703|Homo sapiens protein ( Homo sapiens ...    30   7.6  

>BC132669-1|AAI32670.1|  703|Homo sapiens DEAH (Asp-Glu-Ala-His) box
           polypeptide 35 protein.
          Length = 703

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -2

Query: 290 ALEIYSISLHLKTSSIYSAFLVVQAISIFNKLSRSLSSVLIASNDVLAASLT 135
           AL    +  HL+   +Y+     + + +F ++SRS+  V++A+N V   S+T
Sbjct: 300 ALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATN-VAETSIT 350


>AL023803-3|CAI22034.1|  679|Homo sapiens DEAH (Asp-Glu-Ala-His) box
           polypeptide 35 protein.
          Length = 679

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -2

Query: 290 ALEIYSISLHLKTSSIYSAFLVVQAISIFNKLSRSLSSVLIASNDVLAASLT 135
           AL    +  HL+   +Y+     + + +F ++SRS+  V++A+N V   S+T
Sbjct: 300 ALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATN-VAETSIT 350


>AL023803-2|CAI22035.1|  703|Homo sapiens DEAH (Asp-Glu-Ala-His) box
           polypeptide 35 protein.
          Length = 703

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -2

Query: 290 ALEIYSISLHLKTSSIYSAFLVVQAISIFNKLSRSLSSVLIASNDVLAASLT 135
           AL    +  HL+   +Y+     + + +F ++SRS+  V++A+N V   S+T
Sbjct: 300 ALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATN-VAETSIT 350


>AK026412-1|BAB15476.1|  703|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22759 fis, clone KAIA0875. ).
          Length = 703

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -2

Query: 290 ALEIYSISLHLKTSSIYSAFLVVQAISIFNKLSRSLSSVLIASNDVLAASLT 135
           AL    +  HL+   +Y+     + + +F ++SRS+  V++A+N V   S+T
Sbjct: 300 ALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATN-VAETSIT 350


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,617,931
Number of Sequences: 237096
Number of extensions: 1273934
Number of successful extensions: 2335
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2335
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)