Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24n14
         (624 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak k...    29   3.6  
U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak k...    29   3.6  
Z83233-7|CAB05764.2|  340|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z32683-15|CAE17933.2|  375|Caenorhabditis elegans Hypothetical p...    28   6.2  
AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical ...    27   8.2  

>U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform b protein.
          Length = 422

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +1

Query: 427 LKDEIRVEEFYHYVKDRQPQDAYKWLQNCSLGFIETVIKEESND 558
           LK  ++VE+         P+D ++W ++ +  ++ETV+   +ND
Sbjct: 19  LKQRMKVEQAVLDSARHPPEDVHQWSEHHTSHWVETVLGRVAND 62


>U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform a protein.
          Length = 516

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +1

Query: 427 LKDEIRVEEFYHYVKDRQPQDAYKWLQNCSLGFIETVIKEESND 558
           LK  ++VE+         P+D ++W ++ +  ++ETV+   +ND
Sbjct: 113 LKQRMKVEQAVLDSARHPPEDVHQWSEHHTSHWVETVLGRVAND 156


>Z83233-7|CAB05764.2|  340|Caenorhabditis elegans Hypothetical
           protein K06B4.7 protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 319 DKQYSHFINPTYLHNELFPNMLK-QGINKLMLHIRLNLKD 435
           DK YSHF+N   L +    ++LK +GI KL+      L D
Sbjct: 100 DKNYSHFVNFYSLEDPSLADILKDRGIMKLVKRTPKTLND 139


>Z32683-15|CAE17933.2|  375|Caenorhabditis elegans Hypothetical
           protein R07E5.17 protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 428 KFSLICNMSLFMPCFNIFGNNSL*RYVGF 342
           KF +ICN  LF+ C+   GN  +   +GF
Sbjct: 2   KFIIICNWLLFLLCYKWLGNWEIPINLGF 30


>AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical
           protein Y64G10A.6 protein.
          Length = 846

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +1

Query: 343 NPTYLHNELFPNMLKQGINKLMLHIRLNLKDEIRVEEFYHYVKD 474
           NP + H+   P +LKQ I+ L+++   + + E  V  F   ++D
Sbjct: 460 NPAFSHSGSIPLILKQSISVLIVYSHDSAQHEAAVLAFAELLRD 503


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,325,882
Number of Sequences: 27780
Number of extensions: 236303
Number of successful extensions: 716
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)