Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24n07
(575 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U37429-16|AAA79341.1| 597|Caenorhabditis elegans Protein kinase... 73 1e-13
AF025666-1|AAB88885.1| 597|Caenorhabditis elegans protein kinas... 73 1e-13
Z83239-7|CAB05806.2| 345|Caenorhabditis elegans Hypothetical pr... 29 1.8
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 28 4.1
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 28 4.1
Z77655-8|CAB01138.3| 402|Caenorhabditis elegans Hypothetical pr... 28 5.5
U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical p... 28 5.5
U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical pr... 28 5.5
U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer ... 27 7.2
U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer ... 27 7.2
U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer ... 27 7.2
AF098505-3|AAL27269.2| 578|Caenorhabditis elegans Hypothetical ... 27 7.2
AF098505-2|AAC67416.2| 814|Caenorhabditis elegans Hypothetical ... 27 7.2
AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein. 27 7.2
Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical pr... 27 9.5
AC024771-2|AAK70659.1| 697|Caenorhabditis elegans Hypothetical ... 27 9.5
>U37429-16|AAA79341.1| 597|Caenorhabditis elegans Protein kinase c
protein 3 protein.
Length = 597
Score = 72.9 bits (171), Expect = 1e-13
Identities = 29/89 (32%), Positives = 54/89 (60%)
Frame = +2
Query: 242 DVRVKTVYNGDVMITYINHNITFEEFTHEMVATCRFAPDQVFTMKWVDEEGDPCTISTQL 421
D+++KT + G V++ Y + ++F + C+ Q T+KW+DE+GDP +I +Q+
Sbjct: 12 DIKLKTRFQGQVVVLYARPPLILDDFFALLKDACKQHKKQDITVKWIDEDGDPISIDSQM 71
Query: 422 ELDESLRLYELNRDSELTVHELTSKHPIP 508
ELDE++R ++++EL +H K +P
Sbjct: 72 ELDEAVRCLNSSQEAELNIHVFVGKPELP 100
>AF025666-1|AAB88885.1| 597|Caenorhabditis elegans protein kinase
C3 protein.
Length = 597
Score = 72.9 bits (171), Expect = 1e-13
Identities = 29/89 (32%), Positives = 54/89 (60%)
Frame = +2
Query: 242 DVRVKTVYNGDVMITYINHNITFEEFTHEMVATCRFAPDQVFTMKWVDEEGDPCTISTQL 421
D+++KT + G V++ Y + ++F + C+ Q T+KW+DE+GDP +I +Q+
Sbjct: 12 DIKLKTRFQGQVVVLYARPPLILDDFFALLKDACKQHKKQDITVKWIDEDGDPISIDSQM 71
Query: 422 ELDESLRLYELNRDSELTVHELTSKHPIP 508
ELDE++R ++++EL +H K +P
Sbjct: 72 ELDEAVRCLNSSQEAELNIHVFVGKPELP 100
>Z83239-7|CAB05806.2| 345|Caenorhabditis elegans Hypothetical
protein T09F5.5 protein.
Length = 345
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -2
Query: 316 LLKGYVMVDVCDHHISIVDSFHSYIIYM-VILIHKLCRHH 200
L GY ++ ++H+ ++ S H + M +IL+HK+ RHH
Sbjct: 274 LNSGYYNQEL-NNHVIVIASSHGLLASMCMILVHKVYRHH 312
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 28.3 bits (60), Expect = 4.1
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Frame = +2
Query: 341 CRFAPDQVFTMKWVDEEG------DPCTISTQL-ELDESLRLYELNRDSELTVHELTSKH 499
C+ + KW+D EG DP + +L + D L ELN + L +
Sbjct: 650 CQLVNAEKLIKKWLDVEGALGGYVDPDGVLARLSDQDRRELLEELNFKLNPLIVSLDHEF 709
Query: 500 PIPVSCTNDIPENSRTFL 553
VSC N+ E++RT L
Sbjct: 710 RETVSCVNNCLESARTAL 727
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 28.3 bits (60), Expect = 4.1
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Frame = +2
Query: 341 CRFAPDQVFTMKWVDEEG------DPCTISTQL-ELDESLRLYELNRDSELTVHELTSKH 499
C+ + KW+D EG DP + +L + D L ELN + L +
Sbjct: 650 CQLVNAEKLIKKWLDVEGALGGYVDPDGVLARLSDQDRRELLEELNFKLNPLIVSLDHEF 709
Query: 500 PIPVSCTNDIPENSRTFL 553
VSC N+ E++RT L
Sbjct: 710 RETVSCVNNCLESARTAL 727
>Z77655-8|CAB01138.3| 402|Caenorhabditis elegans Hypothetical
protein C56A3.8a protein.
Length = 402
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +2
Query: 221 NQDNHVNDVRVKTVYNGDVMITYINHNITFEEFTHEMVATCRFAPDQVFTMKWVDEEGDP 400
N D H++++ V+ V ++ + I++ + F E + R P + + W E DP
Sbjct: 213 NTDRHMDNLLVRHVPGEEINLAAIDNGLAFPVRHPECTSRFRSFPFRWSNLPWAQGEFDP 272
>U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical
protein K11G12.6a protein.
Length = 503
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 86 FYQWDCVLLRATVYYYFL 139
+YQWD +LL +TVY L
Sbjct: 2 YYQWDALLLESTVYVAIL 19
>U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical
protein K11G12.6b protein.
Length = 766
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 86 FYQWDCVLLRATVYYYFL 139
+YQWD +LL +TVY L
Sbjct: 265 YYQWDALLLESTVYVAIL 282
>U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform c protein.
Length = 796
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = -1
Query: 188 GHQKCSI*NFYVNDDYLKNNNKPLPSKEHNPIDKSNQILNSL*PTRFKVITTIYKSLTHS 9
G +KCS NF+V+ ++ + N+ E NPI + P FKV I + S
Sbjct: 574 GEKKCSRGNFHVDGGFICSENRYSLGLEPNPIRE---------PVAFKVRKAIVDGIRFS 624
Query: 8 Y 6
Y
Sbjct: 625 Y 625
>U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform a protein.
Length = 892
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = -1
Query: 188 GHQKCSI*NFYVNDDYLKNNNKPLPSKEHNPIDKSNQILNSL*PTRFKVITTIYKSLTHS 9
G +KCS NF+V+ ++ + N+ E NPI + P FKV I + S
Sbjct: 670 GEKKCSRGNFHVDGGFICSENRYSLGLEPNPIRE---------PVAFKVRKAIVDGIRFS 720
Query: 8 Y 6
Y
Sbjct: 721 Y 721
>U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform b protein.
Length = 864
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = -1
Query: 188 GHQKCSI*NFYVNDDYLKNNNKPLPSKEHNPIDKSNQILNSL*PTRFKVITTIYKSLTHS 9
G +KCS NF+V+ ++ + N+ E NPI + P FKV I + S
Sbjct: 642 GEKKCSRGNFHVDGGFICSENRYSLGLEPNPIRE---------PVAFKVRKAIVDGIRFS 692
Query: 8 Y 6
Y
Sbjct: 693 Y 693
>AF098505-3|AAL27269.2| 578|Caenorhabditis elegans Hypothetical
protein Y71H10A.1b protein.
Length = 578
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 341 CRFAPDQVFTMKWVDEEGDPCTIS 412
CR + VF + + EE +PC IS
Sbjct: 141 CRMGAEAVFALMEMTEESEPCVIS 164
>AF098505-2|AAC67416.2| 814|Caenorhabditis elegans Hypothetical
protein Y71H10A.1a protein.
Length = 814
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 341 CRFAPDQVFTMKWVDEEGDPCTIS 412
CR + VF + + EE +PC IS
Sbjct: 344 CRMGAEAVFALMEMTEESEPCVIS 367
>AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein.
Length = 796
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = -1
Query: 188 GHQKCSI*NFYVNDDYLKNNNKPLPSKEHNPIDKSNQILNSL*PTRFKVITTIYKSLTHS 9
G +KCS NF+V+ ++ + N+ E NPI + P FKV I + S
Sbjct: 574 GEKKCSRGNFHVDGGFICSENRYSLGLEPNPIRE---------PVAFKVRKAIVDGIRFS 624
Query: 8 Y 6
Y
Sbjct: 625 Y 625
>Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical
protein F53C11.7 protein.
Length = 478
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 422 ELDESLRLYELNRDSELTVHELTSKHPIPVSCTNDIPENSRTF 550
E + + +L+ ++ VH T HP P + IP+ TF
Sbjct: 176 EYSNKIHIVQLDEEAGELVHRSTFDHPYPATKIMWIPDQKGTF 218
>AC024771-2|AAK70659.1| 697|Caenorhabditis elegans Hypothetical
protein Y40B10A.4 protein.
Length = 697
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = +2
Query: 272 DVMITYINHNITFEEFTHEMVATCRFAPDQVFTMKWVDEEGDPCTISTQLELDESLRLYE 451
D+ + +HN+ E+F HE+V D+ F K +++ D L+ + L + E
Sbjct: 93 DLKLIMEHHNVVIEQFKHEIVDDDN---DEDFQNKCINDMND------VLKFADCLTVSE 143
Query: 452 LNRDSELTVHEL 487
+N T+ EL
Sbjct: 144 MNITGHRTISEL 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,422,225
Number of Sequences: 27780
Number of extensions: 295384
Number of successful extensions: 719
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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