BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24n02
(561 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022940-1|AAY55356.1| 141|Drosophila melanogaster IP04288p pro... 44 1e-04
AE014297-642|AAF54144.3| 191|Drosophila melanogaster CG11286-PA... 37 0.021
AE014134-232|AAF51392.1| 150|Drosophila melanogaster CG14342-PA... 36 0.037
AY069688-1|AAL39833.1| 245|Drosophila melanogaster LD45860p pro... 30 2.5
AF215730-1|AAF19529.1| 245|Drosophila melanogaster proteasome r... 30 2.5
AE014298-1865|AAF48241.1| 245|Drosophila melanogaster CG1591-PA... 30 2.5
AE014135-199|AAN06582.2| 523|Drosophila melanogaster CG11155-PC... 29 3.3
AE014135-198|AAN06581.2| 855|Drosophila melanogaster CG11155-PB... 29 3.3
AE014135-197|AAF59382.3| 910|Drosophila melanogaster CG11155-PA... 29 3.3
AE014298-2655|AAF48792.1| 4081|Drosophila melanogaster CG7092-PA... 29 5.7
AE014296-2144|AAF49916.1| 733|Drosophila melanogaster CG10663-P... 28 7.5
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro... 28 9.9
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC... 28 9.9
>BT022940-1|AAY55356.1| 141|Drosophila melanogaster IP04288p
protein.
Length = 141
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +3
Query: 267 LAYRVVCRHRYHWAKVAQRKQFMKELHSFEKLQANALDGVRVHREFSQGILSHVIPPRRY 446
L Y +CR RY + + F +E+ E++Q A+D +RVHR F+ L + +R
Sbjct: 48 LTYADICRKRYAASFRRYNECFRREMAKHEEMQRCAIDAMRVHRTFAITTLWLPLHSKRE 107
Query: 447 MQK-LTT--DPLTPKERMRVEEII 509
+ L T LT KER R++EI+
Sbjct: 108 INSTLETLEKVLTAKERRRLQEIL 131
>AE014297-642|AAF54144.3| 191|Drosophila melanogaster CG11286-PA
protein.
Length = 191
Score = 36.7 bits (81), Expect = 0.021
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = +3
Query: 228 SDVSIYPSYTKLGLAYRVVCRHRYHWAKVAQRKQFMKELHSFEKLQANALDGVRVHREFS 407
+D S++PSY Y + C RY +K +QF+ E+ Q N D + +
Sbjct: 88 ADASLHPSYDIKHFQYDLNCYVRYLDSKAKYDRQFLHEMEHIIANQRNICDQFFLKKILC 147
Query: 408 QGILSHVIPPRRYMQKLTTD--PLTPKERMRVEEIISGRVNFG 530
+ + +R + + L PKE+ RVE ++ ++ G
Sbjct: 148 YKTMWPPLHTKRELNNFVSKFFQLPPKEKRRVEYLLKTDLSLG 190
>AE014134-232|AAF51392.1| 150|Drosophila melanogaster CG14342-PA
protein.
Length = 150
Score = 35.9 bits (79), Expect = 0.037
Identities = 23/85 (27%), Positives = 41/85 (48%)
Frame = +3
Query: 267 LAYRVVCRHRYHWAKVAQRKQFMKELHSFEKLQANALDGVRVHREFSQGILSHVIPPRRY 446
L Y +CR RY + + F +E+ E++Q A+D +RVHR FS RR+
Sbjct: 48 LTYADICRKRYAASFRRYNECFRREMAKHEEMQRCAIDAMRVHR-FSPPRKDDAC--RRF 104
Query: 447 MQKLTTDPLTPKERMRVEEIISGRV 521
+ + T K +++ +I ++
Sbjct: 105 SSRESPGTRTAKATSKIQILIQAQI 129
>AY069688-1|AAL39833.1| 245|Drosophila melanogaster LD45860p
protein.
Length = 245
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +3
Query: 306 AKVAQRKQFMKELHSFEKLQANALDGVRVHREFSQGILSHVIPPRRYMQKLTTDPLTPKE 485
A++ K F + + +L A + R E Q + V+PP +L P +
Sbjct: 20 AELLITKGFPENIVRLNELLATPIFNERNFEEVHQDLNIPVLPPLLVKNELEDRDSLPTK 79
Query: 486 RMRVEEIISGRVNFG 530
R RV+ I+SG+ G
Sbjct: 80 RQRVDVIVSGQPVMG 94
>AF215730-1|AAF19529.1| 245|Drosophila melanogaster proteasome
regulator dREG protein.
Length = 245
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +3
Query: 306 AKVAQRKQFMKELHSFEKLQANALDGVRVHREFSQGILSHVIPPRRYMQKLTTDPLTPKE 485
A++ K F + + +L A + R E Q + V+PP +L P +
Sbjct: 20 AELLITKGFPENIVRLNELLATPIFNERNFEEVHQDLNIPVLPPLLVKNELEDRDSLPTK 79
Query: 486 RMRVEEIISGRVNFG 530
R RV+ I+SG+ G
Sbjct: 80 RQRVDVIVSGQPVMG 94
>AE014298-1865|AAF48241.1| 245|Drosophila melanogaster CG1591-PA
protein.
Length = 245
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +3
Query: 306 AKVAQRKQFMKELHSFEKLQANALDGVRVHREFSQGILSHVIPPRRYMQKLTTDPLTPKE 485
A++ K F + + +L A + R E Q + V+PP +L P +
Sbjct: 20 AELLITKGFPENIVRLNELLATPIFNERNFEEVHQDLNIPVLPPLLVKNELEDRDSLPTK 79
Query: 486 RMRVEEIISGRVNFG 530
R RV+ I+SG+ G
Sbjct: 80 RQRVDVIVSGQPVMG 94
>AE014135-199|AAN06582.2| 523|Drosophila melanogaster CG11155-PC,
isoform C protein.
Length = 523
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 156 CKMNNPDEIKRRVPLYPGFPELARSDVSIYPSYTKLGLAYRVVCRHRYHWAKVA 317
C+ + I+ R+ L E + +++YPS+T L LAYR + + +W KVA
Sbjct: 127 CEAYDIPHIEGRIDLEYNSKEFS---INLYPSHTLLTLAYRDIMVY-LNWTKVA 176
>AE014135-198|AAN06581.2| 855|Drosophila melanogaster CG11155-PB,
isoform B protein.
Length = 855
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 156 CKMNNPDEIKRRVPLYPGFPELARSDVSIYPSYTKLGLAYRVVCRHRYHWAKVA 317
C+ + I+ R+ L E + +++YPS+T L LAYR + + +W KVA
Sbjct: 127 CEAYDIPHIEGRIDLEYNSKEFS---INLYPSHTLLTLAYRDIMVY-LNWTKVA 176
>AE014135-197|AAF59382.3| 910|Drosophila melanogaster CG11155-PA,
isoform A protein.
Length = 910
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 156 CKMNNPDEIKRRVPLYPGFPELARSDVSIYPSYTKLGLAYRVVCRHRYHWAKVA 317
C+ + I+ R+ L E + +++YPS+T L LAYR + + +W KVA
Sbjct: 127 CEAYDIPHIEGRIDLEYNSKEFS---INLYPSHTLLTLAYRDIMVY-LNWTKVA 176
>AE014298-2655|AAF48792.1| 4081|Drosophila melanogaster CG7092-PA
protein.
Length = 4081
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 123 FDKKPLKTQINCKMNNPDEIKRRVPLYPGFPELARSDVSIYPSYTKLGLAYRVVCR 290
F+K L + C N D+ R +Y F R+++ + S + +G A+R CR
Sbjct: 2471 FEKIILDARDGCNENRKDDPCTRDDIYKFFINRVRNNLHVVMSMSPVGDAFRRRCR 2526
>AE014296-2144|AAF49916.1| 733|Drosophila melanogaster CG10663-PA
protein.
Length = 733
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 168 NPDEIKRRVPLYPGFPELARSDV 236
NPDE+ R +P YPG + DV
Sbjct: 202 NPDEVVRHLPKYPGKDIFSEEDV 224
>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
Length = 16215
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +3
Query: 309 KVAQRKQFMKELHSFEKLQANALDGVRVHREFSQGILSHVIPPRRYMQKLTTDPLTPKER 488
KVAQ++ + + E +Q + + ++ E + + VIPPR QK+ L P R
Sbjct: 5379 KVAQQETVLSQ----EVVQTSQVVEQQIVEETKKTAVRRVIPPREPEQKVEQVTLKPTPR 5434
Query: 489 MRVEEII 509
R +E +
Sbjct: 5435 PRPKEAV 5441
>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
isoform C protein.
Length = 18074
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +3
Query: 309 KVAQRKQFMKELHSFEKLQANALDGVRVHREFSQGILSHVIPPRRYMQKLTTDPLTPKER 488
KVAQ++ + + E +Q + + ++ E + + VIPPR QK+ L P R
Sbjct: 5379 KVAQQETVLSQ----EVVQTSQVVEQQIVEETKKTAVRRVIPPREPEQKVEQVTLKPTPR 5434
Query: 489 MRVEEII 509
R +E +
Sbjct: 5435 PRPKEAV 5441
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,049,952
Number of Sequences: 53049
Number of extensions: 542842
Number of successful extensions: 1068
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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