Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24m24
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.1  
AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding pr...    23   6.1  
AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    23   8.0  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 12/47 (25%), Positives = 17/47 (36%)
 Frame = +1

Query: 178  NDDPSGGGFLNTTNQFGNTATPKKTGRRAARTAPIVIRQALHSGEEG 318
            N+   GG  + T +    T  P+  G     T P  +       EEG
Sbjct: 1399 NESTDGGESMGTASTSSQTDEPRPGGSGGGHTGPAGLISRWRDMEEG 1445


>AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding
           protein OBPjj5c protein.
          Length = 155

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 96  NCLVHCTTAVTRIVFN*QF 152
           NC+  C    T I+FN QF
Sbjct: 32  NCIAECALNETGILFNGQF 50


>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +1

Query: 268 RTAPIVIRQALHSGEEGVKIW 330
           R   I I  ALH  E  VKIW
Sbjct: 80  RARRIEIANALHLNETQVKIW 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,417
Number of Sequences: 2352
Number of extensions: 12528
Number of successful extensions: 59
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)