Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24m23
         (628 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.6  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   5.6  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   5.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.8  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +3

Query: 60  LLYLYGQVQCIKVHKKYFNIYSGSVSVKIRKR 155
           +LY+YG++ C+ +  ++ N+   + S  +R R
Sbjct: 214 MLYVYGRISCV-IASRHRNL-EATESENVRPR 243


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 181 LLRAKSSNNRFLIFT 137
           +L+AK+  NRF +FT
Sbjct: 310 MLKAKNMENRFPLFT 324


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 32  KPKKG*TALFIVFIWTGSV 88
           K  +G   LFIV IWT ++
Sbjct: 156 KLSRGQVILFIVLIWTYTI 174


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 6   HENIIVVILNQKKVKPHY 59
           ++NI+   L  KK++P Y
Sbjct: 424 YQNILSYFLRYKKLQPQY 441


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,976
Number of Sequences: 438
Number of extensions: 3262
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)