Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24m20
         (644 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53148-1|AAB37071.1|  175|Caenorhabditis elegans Hypothetical pr...    63   2e-10
Z71261-3|CAA95802.1|  130|Caenorhabditis elegans Hypothetical pr...    46   3e-05
AL132860-11|CAB60517.1|  440|Caenorhabditis elegans Hypothetical...    30   1.2  
AF069986-1|AAC39136.1|  440|Caenorhabditis elegans nitrilase and...    30   1.2  
AC024880-3|AAF60915.3|  675|Caenorhabditis elegans Hypothetical ...    28   6.5  
AF047655-5|AAC04399.1|  820|Caenorhabditis elegans Hypothetical ...    27   8.6  

>U53148-1|AAB37071.1|  175|Caenorhabditis elegans Hypothetical
           protein C26F1.7 protein.
          Length = 175

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 47/135 (34%), Positives = 61/135 (45%)
 Frame = +3

Query: 135 CIFCNIANKLEGTEILYEDDEVCVFRDIKPASRFHILTIPKRHIEDVKSLTSADKELQKS 314
           C FC+I    +  + L E+    V  DIKP ++ H L + K+HI     LT AD  L + 
Sbjct: 11  CKFCDIVKNKKELQ-LKENKSCVVINDIKPKAKNHYLVLSKQHIAKPTDLTVADVPLLE- 68

Query: 315 ENSPPHIEWLRSHMDMIV*AMPVNRMMSISRELLSKNNLSIEDARFGYHWPPFRSVKHLH 494
           E      E LR H+     A  V  M+                 R G+H PP  SV HLH
Sbjct: 69  EMEKTGRELLREHLKKKGEADTVEDML-----------------RIGFHLPPLLSVHHLH 111

Query: 495 LHTIAPESEMGFIGR 539
           +H I P S+MG I R
Sbjct: 112 MHIIYPISDMGLISR 126


>Z71261-3|CAA95802.1|  130|Caenorhabditis elegans Hypothetical
           protein F21C3.3 protein.
          Length = 130

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 20/56 (35%), Positives = 31/56 (55%)
 Frame = +3

Query: 138 IFCNIANKLEGTEILYEDDEVCVFRDIKPASRFHILTIPKRHIEDVKSLTSADKEL 305
           +F  I  K    +I++EDDE   F D+ P +  H L IPKR I+ +++   +D  L
Sbjct: 22  LFGKIIRKEIPAKIIFEDDEALAFHDVSPQAPIHFLVIPKRRIDMLENAVDSDAAL 77


>AL132860-11|CAB60517.1|  440|Caenorhabditis elegans Hypothetical
           protein Y56A3A.13 protein.
          Length = 440

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 177 ILYEDDEVCVFRDIKPASRFHILTIPKRHIEDVKSLTSAD 296
           I Y      VF ++KP +  H+L  PKR +  +  LT A+
Sbjct: 311 IFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAE 350


>AF069986-1|AAC39136.1|  440|Caenorhabditis elegans nitrilase and
           fragile histidinetriad fusion protein NitFhit protein.
          Length = 440

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 177 ILYEDDEVCVFRDIKPASRFHILTIPKRHIEDVKSLTSAD 296
           I Y      VF ++KP +  H+L  PKR +  +  LT A+
Sbjct: 311 IFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAE 350


>AC024880-3|AAF60915.3|  675|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.1 protein.
          Length = 675

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +3

Query: 180 LYEDDEVCVFRDIKPASR-FHILTIPKRHIEDVKSLTS-ADKELQKSENSPPHIEWL 344
           LYE+ ++  F +++PA +          H   +  +T+ AD E++   + PP+ +WL
Sbjct: 11  LYENVDLSSFSELEPACKELDFAAFEDIHASCLLRITNTADLEVRLRRDGPPNDQWL 67


>AF047655-5|AAC04399.1|  820|Caenorhabditis elegans Hypothetical
           protein C17B7.5 protein.
          Length = 820

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 243 LTIPKRHIEDVKSLTSADKELQKSENSPPHIEWLRSHMDM 362
           +T   R IE     TS D E  +   S P + W + H+D+
Sbjct: 603 MTTTPRSIETTTPSTSNDTESNQDVISTPLLAWRQGHIDL 642


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,381,339
Number of Sequences: 27780
Number of extensions: 304382
Number of successful extensions: 672
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)