Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24m18
         (605 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003770-1|AAO41449.1|  386|Drosophila melanogaster RE24895p pro...    33   0.30 
AE013599-928|AAM68795.1|  219|Drosophila melanogaster CG30001-PA...    33   0.30 
AE014297-4120|AAF56700.1|  288|Drosophila melanogaster CG3330-PA...    28   8.6  

>BT003770-1|AAO41449.1|  386|Drosophila melanogaster RE24895p
           protein.
          Length = 386

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
 Frame = +3

Query: 327 LFLYNELE--ATIFTAGDHAHISALEKTLISSMVLGML--ALMVHLWVCSMRFFQYYLDT 494
           +FL +E E  A +F +  +   SAL+ TLI +  LG L   L+ +  +CS+ + ++   T
Sbjct: 103 IFLESEFELLANVFFSAAYDAESALKLTLILTSALGNLYSGLVGNPKICSLAYVEFLCKT 162

Query: 495 LIRDSPSMLLEMTTAGLLGSQHSDIV 572
           L  ++ ++ + M  + LL    S+ V
Sbjct: 163 LPDEALNVCMNMHLSTLLDLHRSENV 188


>AE013599-928|AAM68795.1|  219|Drosophila melanogaster CG30001-PA
           protein.
          Length = 219

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
 Frame = +3

Query: 327 LFLYNELE--ATIFTAGDHAHISALEKTLISSMVLGML--ALMVHLWVCSMRFFQYYLDT 494
           +FL +E E  A +F +  +   SAL+ TLI +  LG L   L+ +  +CS+ + ++   T
Sbjct: 103 IFLESEFELLANVFFSAAYDAESALKLTLILTSALGNLYSGLVGNPKICSLAYVEFLCKT 162

Query: 495 LIRDSPSMLLEMTTAGLLGSQHSDIV 572
           L  ++ ++ + M  + LL    S+ V
Sbjct: 163 LPDEALNVCMNMHLSTLLDLHRSENV 188


>AE014297-4120|AAF56700.1|  288|Drosophila melanogaster CG3330-PA
           protein.
          Length = 288

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -2

Query: 361 NIVASSSLYRNRAAALAKTTVGPTPHTSPLQLNHFAIVSK*ESQISQCAEKLTDLPAIHK 182
           +IV +    +++ A + K +VGP P  + L+    AIVS+  S  S  ++ L  L +  K
Sbjct: 99  SIVQADRALQSKPAMMPKYSVGPAPEKADLRSKGGAIVSQQRSAKSLKSKSLKSLKSKSK 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,968,041
Number of Sequences: 53049
Number of extensions: 623553
Number of successful extensions: 1759
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1759
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)