BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24m11
(605 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 49 4e-08
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 41 8e-06
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 40 3e-05
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 39 3e-05
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 38 8e-05
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 36 3e-04
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 33 0.002
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 29 0.047
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 26 0.33
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 24 1.3
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 2.3
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 9.4
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 9.4
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 48.8 bits (111), Expect = 4e-08
Identities = 26/81 (32%), Positives = 36/81 (44%)
Frame = +2
Query: 248 YVCDYCNRIFTRKYNLQTHIENLHVNSSCHCEVCGKRFGTTTGFHLHLSAGHNRYGQPLP 427
YVC C + FT L+ H C++CGK FG LH A YG+ +
Sbjct: 204 YVCKACGKGFTCSKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQVA---HYGEKVY 260
Query: 428 ECDLCGRIFTRKQNIVSHMIT 490
+C LC F K+ + H+ T
Sbjct: 261 KCTLCHETFGSKKTMELHIKT 281
Score = 46.4 bits (105), Expect = 2e-07
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Frame = +2
Query: 248 YVCDYCNRIFTRKYNLQTHIEN--LHVNSSCHCEVCGKRFGTTTGFHLHLSAGHNRYGQP 421
Y C C + F +K Q+H+ + C +CGK F H G+
Sbjct: 62 YQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHY---RTHTGEK 118
Query: 422 LPECDLCGRIFTRKQNIVSHMITVHLQGLGNEIRCRFCSKTFTTGRNLKRHVNL 583
+C+ C + F+ K+N+ H +H + +C C + F L RH+ +
Sbjct: 119 PYQCEYCSKSFSVKENLSVHR-RIHTK--ERPYKCDVCERAFEHSGKLHRHMRI 169
Score = 44.0 bits (99), Expect = 1e-06
Identities = 30/110 (27%), Positives = 42/110 (38%)
Frame = +2
Query: 248 YVCDYCNRIFTRKYNLQTHIENLHVNSSCHCEVCGKRFGTTTGFHLHLSAGHNRYGQPLP 427
Y C+ C + F L H CE C K F +H H + +P
Sbjct: 92 YRCNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHRRI-HTK-ERPY- 148
Query: 428 ECDLCGRIFTRKQNIVSHMITVHLQGLGNEIRCRFCSKTFTTGRNLKRHV 577
+CD+C R F + HM +H + +C CSKTF L H+
Sbjct: 149 KCDVCERAFEHSGKLHRHM-RIHTGERPH--KCTVCSKTFIQSGQLVIHM 195
Score = 43.6 bits (98), Expect = 2e-06
Identities = 25/93 (26%), Positives = 42/93 (45%)
Frame = +2
Query: 296 QTHIENLHVNSSCHCEVCGKRFGTTTGFHLHLSAGHNRYGQPLPECDLCGRIFTRKQNIV 475
+T + N+ + C +C K F + HL + H + G+ C++CG+ F +
Sbjct: 51 ETPLTNIE-EKTYQCLLCQKAFDQKNLYQSHLRS-HGKEGEDPYRCNICGKTFAVPARLT 108
Query: 476 SHMITVHLQGLGNEIRCRFCSKTFTTGRNLKRH 574
H T H +C +CSK+F+ NL H
Sbjct: 109 RHYRT-HTG--EKPYQCEYCSKSFSVKENLSVH 138
Score = 43.6 bits (98), Expect = 2e-06
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = +2
Query: 254 CDYCNRIFTRKYNLQTHIENLHVNSSCHCEVCGKRFGTTTGFHLHLSAGHNRYGQPLPEC 433
C C++ F + L H+ C+ CGK F + +H G+ C
Sbjct: 178 CTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHT---RTHTGEKPYTC 234
Query: 434 DLCGRIFTRKQNIVSHMITVH-LQGLGNEI-RCRFCSKTFTTGRNLKRHV 577
D+CG+ F +H++ +H + G ++ +C C +TF + + ++ H+
Sbjct: 235 DICGKSFG-----YNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHI 279
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 41.1 bits (92), Expect = 8e-06
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +2
Query: 383 LHLSAGHNRYGQPLPE-----CDLCGRIFTRKQNIVSHMITVHLQGLGNEIRCRFCSKTF 547
L + H +G LP CD+CG+ + K + H H Q L + + C C K F
Sbjct: 353 LAMRLSHPLHGNLLPPGVCYTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAV-CALCHKVF 411
Query: 548 TTGRNLKRHVNLLH 589
T +L H ++ H
Sbjct: 412 RTLNSLNNHKSIYH 425
Score = 38.7 bits (86), Expect = 4e-05
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 248 YVCDYCNRIFTRKYNLQTHIENLHVN--SSCHCEVCGKRFGTTTGFHLHLSAGHNR 409
Y CD C + + K L+ H E H +S C +C K F T + H S H R
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIYHRR 427
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 39.5 bits (88), Expect = 3e-05
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 254 CDYCNRIFTRKYNLQTHIENLHVNSSC--HCEVCGKRFGTTTGFHLHLSAGH 403
C YC R F+ Y+L+ H ++ H S CE C +R+ T H S H
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQH 59
Score = 31.5 bits (68), Expect = 0.007
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 248 YVCDYCNRIFTRKYNLQTHIENLHVNSS 331
YVC++CNR + K +L TH H SS
Sbjct: 36 YVCEFCNRRYRTKNSLTTHKSLQHRGSS 63
Score = 30.7 bits (66), Expect = 0.012
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 428 ECDLCGRIFTRKQNIVSHMITVHLQGLGNEIRCRFCSKTFTTGRNLKRHVNLLH 589
EC C R F+ ++ H H Q + C FC++ + T +L H +L H
Sbjct: 7 ECPYCRRNFSCYYSLKRHFQDKHEQSDTLYV-CEFCNRRYRTKNSLTTHKSLQH 59
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 39.1 bits (87), Expect = 3e-05
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 245 DYVCDYCNRIFTRKYNLQTHIENLHVNSSCH--CEVCGKRFGTTTGFHLHLSAGHNRYGQ 418
++ C+ CN+I T L+ HI+N+H S C +C + + + H S H ++ +
Sbjct: 2 EFRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQHSK 61
Score = 35.5 bits (78), Expect = 4e-04
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 338 CEVCGKRFGTTTGFHLHLSAGHNRYGQPLPECDLCGRIFTRKQNIVSHMITVHLQGLGNE 517
CE C K + T H+ H R + P C++C R+++ ++ +H H Q NE
Sbjct: 5 CEPCNKILTSLTRLRRHIQNVHTRPSKE-PICNICKRVYSSLNSLRNHKSIYHRQHSKNE 63
Score = 27.9 bits (59), Expect = 0.082
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 512 NEIRCRFCSKTFTTGRNLKRHVNLLH 589
+E RC C+K T+ L+RH+ +H
Sbjct: 1 DEFRCEPCNKILTSLTRLRRHIQNVH 26
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 37.9 bits (84), Expect = 8e-05
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 248 YVCDYCNRIFTRKYNLQTHIENLHVNSS-CHCEVCGKRFGTTTGFHLHLSAGHNRYGQPL 424
+ C C++ FTR ++L+TH+ LH HC C ++F HL H G+
Sbjct: 10 FECPECHKRFTRDHHLKTHM-RLHTGEKPYHCSHCDRQFVQVANLRRHLRV-HT--GERP 65
Query: 425 PECDLC 442
C+LC
Sbjct: 66 YACELC 71
Score = 32.3 bits (70), Expect = 0.004
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 428 ECDLCGRIFTRKQNIVSHMITVHLQGLGNEIRCRFCSKTFTTGRNLKRHVNL 583
EC C + FTR ++ +HM L C C + F NL+RH+ +
Sbjct: 11 ECPECHKRFTRDHHLKTHM---RLHTGEKPYHCSHCDRQFVQVANLRRHLRV 59
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 35.9 bits (79), Expect = 3e-04
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +2
Query: 431 CDLCGRIFTRKQNIVSHMITVHLQGLGNEIRCRFCSKTFTTGRNLKRHVNLLH 589
C LCG++ K ++ H+ H + E RC C + + + +L H+ H
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAE-RQEEYRCVICERVYCSRNSLMTHIYTYH 59
Score = 32.7 bits (71), Expect = 0.003
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +2
Query: 338 CEVCGKRFGTTTGFHLHLSAGHNRYGQPLPECDLCGRIFTRKQNIVSHMITVH 496
C++CGK + H++ H + C +C R++ + ++++H+ T H
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQEEY-RCVICERVYCSRNSLMTHIYTYH 59
Score = 26.6 bits (56), Expect = 0.19
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 245 DYVCDYCNRIFTRKYNLQTHIENLH 319
+Y C C R++ + +L THI H
Sbjct: 35 EYRCVICERVYCSRNSLMTHIYTYH 59
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 33.5 bits (73), Expect = 0.002
Identities = 19/69 (27%), Positives = 27/69 (39%)
Frame = +2
Query: 248 YVCDYCNRIFTRKYNLQTHIENLHVNSSCHCEVCGKRFGTTTGFHLHLSAGHNRYGQPLP 427
+ C YC +++ L+ HI H C C +CGK F H+ G+
Sbjct: 17 FSCKYCEKVYVSLGALKMHIRT-H-TLPCKCHLCGKAFSRPWLLQGHI---RTHTGEKPF 71
Query: 428 ECDLCGRIF 454
C C R F
Sbjct: 72 SCQHCNRAF 80
Score = 26.2 bits (55), Expect = 0.25
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +2
Query: 329 SCHCEVCGKRFGTTTGFHLHLSAGHNRYGQPLP-ECDLCGRIFTRKQNIVSHMITVHLQG 505
S C+ C K + + +H+ LP +C LCG+ F+R + H I H
Sbjct: 16 SFSCKYCEKVYVSLGALKMHIRT------HTLPCKCHLCGKAFSRPWLLQGH-IRTHTG- 67
Query: 506 LGNEIRCRFCSKTF 547
C+ C++ F
Sbjct: 68 -EKPFSCQHCNRAF 80
Score = 21.4 bits (43), Expect = 7.1
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = +2
Query: 524 CRFCSKTFTTGRNLKRHV 577
C++C K + + LK H+
Sbjct: 19 CKYCEKVYVSLGALKMHI 36
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 28.7 bits (61), Expect = 0.047
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 110 INTSFN*ENYDYRIYTENF*NRKRSVQCKLIDTMNQNQN 226
+N FN + ++RI N N ++ +C + N NQN
Sbjct: 390 VNNDFNFDEVNFRILGANVNNLIKNTRCAKSNNQNNNQN 428
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 25.8 bits (54), Expect = 0.33
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 107 WINTSFN*ENYDYRIYTENF*NRKRSVQCKLIDTMNQNQN 226
+IN +N ++RI N + + +C D N NQN
Sbjct: 555 FINNDYNFNEVNFRILGANVNDLIMNTRCANSDNQNNNQN 594
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/50 (24%), Positives = 20/50 (40%)
Frame = +2
Query: 284 KYNLQTHIENLHVNSSCHCEVCGKRFGTTTGFHLHLSAGHNRYGQPLPEC 433
K++L+ H+ N + CE C + + HL + N Y C
Sbjct: 1 KHHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANC 50
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 23.0 bits (47), Expect = 2.3
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +2
Query: 110 INTSFN*ENYDYRIYTENF*NRKRSVQCKLIDTMNQ-NQN 226
IN FN + ++RI N + R+ +C N NQN
Sbjct: 392 INNDFNFNDVNFRILGANVDDLMRNTRCGRYHNQNAGNQN 431
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 388 SVSRAQSLRSTAARMRPLRPDLH*ETEHSL 477
S++R SL STAA + H + H L
Sbjct: 211 SIARCWSLDSTAASDEDISLTTHQQKRHKL 240
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 341 RSGRRSSRADSLCAFEGCISW 279
R GRR SR+ L A +SW
Sbjct: 85 RHGRRQSRSMDLNAHREQMSW 105
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,518
Number of Sequences: 438
Number of extensions: 3933
Number of successful extensions: 48
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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