Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24m09
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003740-5|AAL08031.1| 195|Caenorhabditis elegans Hypothetical ... 60 1e-09
Z70287-4|CAA94297.1| 299|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z66522-1|CAA91406.3| 425|Caenorhabditis elegans Hypothetical pr... 33 0.14
U00048-11|AAB53833.1| 995|Caenorhabditis elegans Hypothetical p... 31 0.76
L14745-13|AAR25658.1| 210|Caenorhabditis elegans Hypothetical p... 30 1.3
Z81463-7|CAE17701.1| 172|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z69661-3|CAA93490.1| 293|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF125455-2|AAP13747.2| 431|Caenorhabditis elegans Hypothetical ... 29 4.1
Z81563-2|CAB04564.1| 181|Caenorhabditis elegans Hypothetical pr... 28 5.4
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 28 5.4
AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily a... 28 5.4
Z92804-1|CAB07252.1| 338|Caenorhabditis elegans Hypothetical pr... 28 7.1
U53154-4|AAC25851.1| 346|Caenorhabditis elegans Hypothetical pr... 28 7.1
U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical pr... 28 7.1
U23526-1|AAK95866.1| 252|Caenorhabditis elegans Claudin-like in... 28 7.1
EU052683-1|ABU48856.1| 249|Caenorhabditis elegans heparan sulfa... 28 7.1
EU052682-1|ABU48855.1| 278|Caenorhabditis elegans heparan sulfa... 28 7.1
AF252604-1|AAF67350.1| 252|Caenorhabditis elegans Gas3/PMP22-li... 28 7.1
AF098987-1|AAC67432.1| 276|Caenorhabditis elegans Heparan sulph... 28 7.1
AF022982-8|AAB69934.1| 234|Caenorhabditis elegans Hypothetical ... 28 7.1
Z78059-2|CAH04726.2| 538|Caenorhabditis elegans Hypothetical pr... 27 9.4
U88308-2|AAM15557.1| 313|Caenorhabditis elegans Hypothetical pr... 27 9.4
U88308-1|AAB42324.2| 461|Caenorhabditis elegans Hypothetical pr... 27 9.4
>AF003740-5|AAL08031.1| 195|Caenorhabditis elegans Hypothetical
protein C41D11.9 protein.
Length = 195
Score = 60.1 bits (139), Expect = 1e-09
Identities = 30/89 (33%), Positives = 45/89 (50%)
Frame = +1
Query: 394 ITCNRSIDCRYGGFYNYTCTVKPKVVCQGLKTFNKSSMCRFCYQTDKWEHRCEQKANCNS 573
+TC DCR G CT + K + N ++CRFC+Q ++ CE NC++
Sbjct: 38 LTCTFPGDCRIGDTVKVNCTSR-KGCPNPVSRNNVEAVCRFCWQLLPGDYDCEPATNCST 96
Query: 574 LASPLKYYLTNCTVSDDVICLGKRRFLKK 660
S K +T C+ VIC+G+R F K+
Sbjct: 97 --SSTKLLVTKCSAHSSVICMGQRNFYKR 123
>Z70287-4|CAA94297.1| 299|Caenorhabditis elegans Hypothetical
protein R09E10.6 protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -2
Query: 191 KIKQSRMLIRKGRVLCMLEIKAFLLPSNIGILQM 90
K+ +S +L R+GRVLCM+ K F P +I L+M
Sbjct: 30 KVHESDVL-RRGRVLCMIRSKNFFFPDDISSLKM 62
>Z66522-1|CAA91406.3| 425|Caenorhabditis elegans Hypothetical
protein F14E5.3 protein.
Length = 425
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 295 KGVSFSENEEYIKSCPSVDQENMTECSSLLYPCITCNRSI 414
+G +F+ N IK CP ++ N E ++LY C+ N SI
Sbjct: 195 RGCNFTRNSR-IKQCPKTEKVNRDEMYAVLYECMGGNHSI 233
>U00048-11|AAB53833.1| 995|Caenorhabditis elegans Hypothetical
protein C05D11.1 protein.
Length = 995
Score = 31.1 bits (67), Expect = 0.76
Identities = 24/89 (26%), Positives = 41/89 (46%)
Frame = +1
Query: 124 NALISNMHRTLPLRISIRDCFILILLVIMNTIHVTDMANNNMDFHSKENKIKGDSNDKGV 303
NA H L D F+ +L V +N + +T M + F ++ + I G+ ND GV
Sbjct: 92 NAWTDTDHTAYTLSTVGSDGFLKVLPVYINHL-LTPMLTASQ-FATEVHHITGEGNDAGV 149
Query: 304 SFSENEEYIKSCPSVDQENMTECSSLLYP 390
+SE +++ S+ E ++YP
Sbjct: 150 VYSEMQDHESEMESIMDRKTKE---VIYP 175
>L14745-13|AAR25658.1| 210|Caenorhabditis elegans Hypothetical
protein C02F5.13 protein.
Length = 210
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 433 FYNYTCTVKPKVVCQGLKTFNKSSMC 510
F N C V P + C G +TF KS+ C
Sbjct: 113 FTNVKCRVLPCIECHGPRTFTKSTPC 138
>Z81463-7|CAE17701.1| 172|Caenorhabditis elegans Hypothetical
protein C06B8.11 protein.
Length = 172
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Frame = +1
Query: 250 DFHSKENK--IKGDSNDKGV-SFSENEEYIKSCPSVDQENMTECSSLLYPCITCNRSIDC 420
DF N + G +GV ++ + +++ P+ D C S Y C++ I+
Sbjct: 60 DFRCAANSKSLGGHCQIEGVQTYGDKYRFLRGIPAFDCGKNGVCLSSPYYNFCCDKRIED 119
Query: 421 RYGGFYNYTCTVKPKVVCQGLKTF---NKSSMCRFC 519
+Y ++ C KVV G + KS FC
Sbjct: 120 KYNADFDPKCARGTKVVKDGESGYILRGKSCKSNFC 155
>Z69661-3|CAA93490.1| 293|Caenorhabditis elegans Hypothetical
protein F48F7.5 protein.
Length = 293
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Frame = +1
Query: 226 TDMANNNMDFHSKENKIKGDSNDK-GVSFSENEE----YIKSCPSVDQENMTE 369
TD+ +++D + +E ++ +SND F E +E Y++ P+ D+E + E
Sbjct: 231 TDLEGSDVDENREEKELIDESNDSDDTEFEEEDEYETDYVEDEPTFDEETIPE 283
>AF125455-2|AAP13747.2| 431|Caenorhabditis elegans Hypothetical
protein Y48A5A.1 protein.
Length = 431
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 514 FCY--QTDKWEHRCEQKANCNSLASPLKYYLTNCTVSDDVICLGKR 645
+CY + + WE CE NC L+ L ++ +V + ++ +R
Sbjct: 267 YCYDQRVNDWESACESGWNCAKLSPSLSFFAKFSSVKECLLACTRR 312
>Z81563-2|CAB04564.1| 181|Caenorhabditis elegans Hypothetical
protein K04H8.2 protein.
Length = 181
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 358 NMTECSSLLYPCIT-CNRSIDCRYGGFYNYTC 450
N TE + C+T C+ +DC GF N TC
Sbjct: 60 NFTEKTVNWSSCVTNCHNKLDCIVAGFENGTC 91
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 253 FHSKENKIKGDSNDKGVSFSENEEYIKSCPSVDQENMTECSSLLYPCI 396
F + + I S G SF N E CP D +N++ECS YP +
Sbjct: 262 FGNDNDSISQVSTTSG-SFG-NHENDHFCPFSDDDNISECSDDYYPTL 307
>AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily
assigned gene nameprotein 123 protein.
Length = 655
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = -1
Query: 471 NYFWFHCTCIIIETSISAIYTPVTCY----TRVQ*RGTFSHILLIN*WTTF-YVFFILTK 307
+Y W+ + + + +AIY + C T++ GT S IL + + F ++FF++T
Sbjct: 577 DYHWWWRS--FMTSGFTAIYLFIYCIHFFNTKLTISGTISTILYFSYTSIFVFMFFLMTG 634
Query: 306 TYTFVI*ITFYFI 268
T F+ T+YF+
Sbjct: 635 TIGFLA--TYYFV 645
>Z92804-1|CAB07252.1| 338|Caenorhabditis elegans Hypothetical
protein K05D4.2 protein.
Length = 338
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 160 LRISIRDCFILILLVIMN 213
LR S+R+CF+ ILLV+ N
Sbjct: 127 LRFSLRNCFLWILLVLSN 144
>U53154-4|AAC25851.1| 346|Caenorhabditis elegans Hypothetical
protein C33G8.9 protein.
Length = 346
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 433 FYNYTCTVKPKVVCQGLKTFNKSSMCRFC 519
F Y + KP++ C + F+ S CR+C
Sbjct: 27 FRRYVNSKKPQIECTCSQKFDSSGPCRYC 55
>U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical
protein SSSD1.1 protein.
Length = 636
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 301 VSFSENEEYIKSCPSVDQENMTECSSLLYPCITCN 405
+++S NE+ I + P + N+ E LY C+ N
Sbjct: 73 ITWSRNEQIISTSPVLTLSNLEEGDKGLYTCLAVN 107
>U23526-1|AAK95866.1| 252|Caenorhabditis elegans Claudin-like in
caenorhabditisprotein 2 protein.
Length = 252
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 133 ISNMHRTLPLRISIRDCFILILLVIMNTIHVTDMANNNMDFHSKEN 270
I HR I++ F+ ++ +I++ +HV A N+ S++N
Sbjct: 162 IYEKHRGYSWYIALTGAFVYLVAIILSVVHVLLQARNSNTTMSRQN 207
>EU052683-1|ABU48856.1| 249|Caenorhabditis elegans heparan sulfate
3-O sulfotransferaseisoform b protein.
Length = 249
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -1
Query: 249 HVIISHIGDMYCVHYY**NQNKTVSNAYT*RQSSMHVGNQSISSSIEYRYLTNALYNVMI 70
H + + D V+Y QNKT+ + G + I+ +EY+ +TN+LY+V I
Sbjct: 143 HPVYRTVSDFTQVYYNKLEQNKTLPVLSVEAFKTNEAGIEKIN--MEYKPMTNSLYDVHI 200
>EU052682-1|ABU48855.1| 278|Caenorhabditis elegans heparan sulfate
3-O sulfotransferaseisoform a protein.
Length = 278
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -1
Query: 249 HVIISHIGDMYCVHYY**NQNKTVSNAYT*RQSSMHVGNQSISSSIEYRYLTNALYNVMI 70
H + + D V+Y QNKT+ + G + I+ +EY+ +TN+LY+V I
Sbjct: 143 HPVYRTVSDFTQVYYNKLEQNKTLPVLSVEAFKTNEAGIEKIN--MEYKPMTNSLYDVHI 200
>AF252604-1|AAF67350.1| 252|Caenorhabditis elegans Gas3/PMP22-like
protein protein.
Length = 252
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 133 ISNMHRTLPLRISIRDCFILILLVIMNTIHVTDMANNNMDFHSKEN 270
I HR I++ F+ ++ +I++ +HV A N+ S++N
Sbjct: 162 IYEKHRGYSWYIALTGAFVYLVAIILSVVHVLLQARNSNTTMSRQN 207
>AF098987-1|AAC67432.1| 276|Caenorhabditis elegans Heparan
sulphotransferase protein 3 protein.
Length = 276
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -1
Query: 249 HVIISHIGDMYCVHYY**NQNKTVSNAYT*RQSSMHVGNQSISSSIEYRYLTNALYNVMI 70
H + + D V+Y QNKT+ + G + I+ +EY+ +TN+LY+V I
Sbjct: 143 HPVYRTVSDFTQVYYNKLEQNKTLPVLSVEAFKTNEAGIEKIN--MEYKPMTNSLYDVHI 200
>AF022982-8|AAB69934.1| 234|Caenorhabditis elegans Hypothetical
protein T23B12.1 protein.
Length = 234
Score = 27.9 bits (59), Expect = 7.1
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +1
Query: 442 YTCTVKPKVVCQGLKTF-NKSSMCRFCYQTDKWEHRCE-QKANCNSLASP-LKYYLTNCT 612
Y + +P VC G+ N+ CR C D + C + + P KYY C
Sbjct: 143 YCTSEQPCAVCHGVSLAGNQVLACRRC--RDCYHMACSIPTVSIEEASEPSFKYYCKTCL 200
Query: 613 VSDDVICLGKRRFLKKSKM 669
VS VI + R +K+
Sbjct: 201 VSKKVIDSNRSRSPSPAKL 219
>Z78059-2|CAH04726.2| 538|Caenorhabditis elegans Hypothetical
protein C34B4.4 protein.
Length = 538
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 544 RCEQKANCNSLASPLKYYLTNCTVS 618
RC Q NCNS SP+ Y L+ TVS
Sbjct: 126 RCSQ-TNCNSPESPIPYPLSPPTVS 149
>U88308-2|AAM15557.1| 313|Caenorhabditis elegans Hypothetical
protein C32E8.6b protein.
Length = 313
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 265 ENKIKGDSNDKGVSFSENEEYIKSCPSVDQENMTECSSLLYPCITCNRSID 417
ENK D+ +SF E EYI +V E T+ ++ L + C S D
Sbjct: 17 ENKTCLIWRDREISFKEFHEYIGKWKNVLDEQKTKTTNPLRIALFCTNSPD 67
>U88308-1|AAB42324.2| 461|Caenorhabditis elegans Hypothetical
protein C32E8.6a protein.
Length = 461
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 265 ENKIKGDSNDKGVSFSENEEYIKSCPSVDQENMTECSSLLYPCITCNRSID 417
ENK D+ +SF E EYI +V E T+ ++ L + C S D
Sbjct: 17 ENKTCLIWRDREISFKEFHEYIGKWKNVLDEQKTKTTNPLRIALFCTNSPD 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,880,783
Number of Sequences: 27780
Number of extensions: 313752
Number of successful extensions: 856
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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