Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24m06
         (403 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated...    30   2.5  
AK127686-1|BAC87084.1|  401|Homo sapiens protein ( Homo sapiens ...    30   2.5  
AK124902-1|BAC85988.1| 1168|Homo sapiens protein ( Homo sapiens ...    30   2.5  
BC024197-1|AAH24197.1|  803|Homo sapiens zinc finger protein 226...    30   3.3  
AK023091-1|BAB14398.1|  803|Homo sapiens protein ( Homo sapiens ...    30   3.3  
AF228418-1|AAF34786.1|  803|Homo sapiens zinc finger protein ZNF...    30   3.3  
AC074331-3|AAF88103.1|  803|Homo sapiens zinc finger protein 226...    30   3.3  

>DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated
            protein protein.
          Length = 5005

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = -2

Query: 246  LESMQDFCQTFFDETSQLNVPYLFSSTISASTVDFLEDPEQLRSVALFHLCTFTDTKQLI 67
            L S +     F+ +   + V   FSS +S S  + L+ P+Q RS   F      D+    
Sbjct: 1318 LGSTKSLTAAFYGDKQPVTVGVQFSSDVSRSDENVLDSPKQRRSFGSFPYTPSADSNSFH 1377

Query: 66   NHR 58
             +R
Sbjct: 1378 QYR 1380


>AK127686-1|BAC87084.1|  401|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45784 fis, clone NETRP2006468. ).
          Length = 401

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = -2

Query: 246 LESMQDFCQTFFDETSQLNVPYLFSSTISASTVDFLEDPEQLRSVALFHLCTFTDTKQLI 67
           L S +     F+ +   + V   FSS +S S  + L+ P+Q RS   F      D+    
Sbjct: 304 LGSTKSLTAAFYGDKQPVTVGVQFSSDVSRSDENVLDSPKQRRSFGSFPYTPSADSNSFH 363

Query: 66  NHR 58
            +R
Sbjct: 364 QYR 366


>AK124902-1|BAC85988.1| 1168|Homo sapiens protein ( Homo sapiens cDNA
            FLJ42912 fis, clone BRHIP3024533. ).
          Length = 1168

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = -2

Query: 246  LESMQDFCQTFFDETSQLNVPYLFSSTISASTVDFLEDPEQLRSVALFHLCTFTDTKQLI 67
            L S +     F+ +   + V   FSS +S S  + L+ P+Q RS   F      D+    
Sbjct: 1071 LGSTKSLTAAFYGDKQPVTVGVQFSSDVSRSDENVLDSPKQRRSFGSFPYTPSADSNSFH 1130

Query: 66   NHR 58
             +R
Sbjct: 1131 QYR 1133


>BC024197-1|AAH24197.1|  803|Homo sapiens zinc finger protein 226
           protein.
          Length = 803

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 99  NETKLLNVTARDLPKSPLCWQIWSRKIN 182
           N++KL+ V  R+  +   CWQIW +  N
Sbjct: 82  NQSKLITVQDRESEEELSCWQIWQQIAN 109


>AK023091-1|BAB14398.1|  803|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13029 fis, clone NT2RP3001057, moderately
           similar to ZINC FINGER PROTEIN 91. ).
          Length = 803

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 99  NETKLLNVTARDLPKSPLCWQIWSRKIN 182
           N++KL+ V  R+  +   CWQIW +  N
Sbjct: 82  NQSKLITVQDRESEEELSCWQIWQQIAN 109


>AF228418-1|AAF34786.1|  803|Homo sapiens zinc finger protein ZNF226
           protein.
          Length = 803

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 99  NETKLLNVTARDLPKSPLCWQIWSRKIN 182
           N++KL+ V  R+  +   CWQIW +  N
Sbjct: 82  NQSKLITVQDRESEEELSCWQIWQQIAN 109


>AC074331-3|AAF88103.1|  803|Homo sapiens zinc finger protein 226
           protein.
          Length = 803

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 99  NETKLLNVTARDLPKSPLCWQIWSRKIN 182
           N++KL+ V  R+  +   CWQIW +  N
Sbjct: 82  NQSKLITVQDRESEEELSCWQIWQQIAN 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,880,545
Number of Sequences: 237096
Number of extensions: 1272703
Number of successful extensions: 2348
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2348
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)