Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24m04
         (634 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT007406-1|AAP36074.1|  148|Homo sapiens ring finger protein 24 ...    33   0.84 
BC039584-1|AAH39584.1|  148|Homo sapiens RNF24 protein protein.        33   0.84 
BC000213-1|AAH00213.1|  148|Homo sapiens RNF24 protein protein.        33   0.84 
AL096778-1|CAB46627.1|  148|Homo sapiens hypothetical protein pr...    33   0.84 
AL031670-4|CAB43182.1|  148|Homo sapiens ring finger protein 24 ...    33   0.84 
BC112223-1|AAI12224.1|  831|Homo sapiens solute carrier family 3...    31   3.4  
BC101516-1|AAI01517.1|  831|Homo sapiens solute carrier family 3...    31   3.4  
BC073909-1|AAH73909.1|  361|Homo sapiens SLC39A10 protein protein.     31   3.4  
AB033091-1|BAA86579.1|  835|Homo sapiens KIAA1265 protein protein.     31   3.4  

>BT007406-1|AAP36074.1|  148|Homo sapiens ring finger protein 24
           protein.
          Length = 148

 Score = 33.1 bits (72), Expect = 0.84
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 18  CHLINSHNQIHKRFFSYEVMILKSVVK 98
           C+LI   +Q HK F++Y+ +ILK  VK
Sbjct: 44  CYLIRLRHQAHKEFYAYKQVILKEKVK 70


>BC039584-1|AAH39584.1|  148|Homo sapiens RNF24 protein protein.
          Length = 148

 Score = 33.1 bits (72), Expect = 0.84
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 18  CHLINSHNQIHKRFFSYEVMILKSVVK 98
           C+LI   +Q HK F++Y+ +ILK  VK
Sbjct: 44  CYLIRLRHQAHKEFYAYKQVILKEKVK 70


>BC000213-1|AAH00213.1|  148|Homo sapiens RNF24 protein protein.
          Length = 148

 Score = 33.1 bits (72), Expect = 0.84
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 18  CHLINSHNQIHKRFFSYEVMILKSVVK 98
           C+LI   +Q HK F++Y+ +ILK  VK
Sbjct: 44  CYLIRLRHQAHKEFYAYKQVILKEKVK 70


>AL096778-1|CAB46627.1|  148|Homo sapiens hypothetical protein
           protein.
          Length = 148

 Score = 33.1 bits (72), Expect = 0.84
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 18  CHLINSHNQIHKRFFSYEVMILKSVVK 98
           C+LI   +Q HK F++Y+ +ILK  VK
Sbjct: 44  CYLIRLRHQAHKEFYAYKQVILKEKVK 70


>AL031670-4|CAB43182.1|  148|Homo sapiens ring finger protein 24
           protein.
          Length = 148

 Score = 33.1 bits (72), Expect = 0.84
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 18  CHLINSHNQIHKRFFSYEVMILKSVVK 98
           C+LI   +Q HK F++Y+ +ILK  VK
Sbjct: 44  CYLIRLRHQAHKEFYAYKQVILKEKVK 70


>BC112223-1|AAI12224.1|  831|Homo sapiens solute carrier family 39
           (zinc transporter), member 10 protein.
          Length = 831

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +2

Query: 299 QHYKKERRNKNWFVKAFQWYTQERTINQRNRRRFDYE-NNLPEFSAWLDNK 448
           +HYK++R  + WF+K     T+E TI    R+  D++ NN P+ S WL  K
Sbjct: 519 KHYKQQRGKQKWFMKQ---NTEESTI---GRKLSDHKLNNTPD-SDWLQLK 562


>BC101516-1|AAI01517.1|  831|Homo sapiens solute carrier family 39
           (zinc transporter), member 10 protein.
          Length = 831

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +2

Query: 299 QHYKKERRNKNWFVKAFQWYTQERTINQRNRRRFDYE-NNLPEFSAWLDNK 448
           +HYK++R  + WF+K     T+E TI    R+  D++ NN P+ S WL  K
Sbjct: 519 KHYKQQRGKQKWFMKQ---NTEESTI---GRKLSDHKLNNTPD-SDWLQLK 562


>BC073909-1|AAH73909.1|  361|Homo sapiens SLC39A10 protein protein.
          Length = 361

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +2

Query: 299 QHYKKERRNKNWFVKAFQWYTQERTINQRNRRRFDYE-NNLPEFSAWLDNK 448
           +HYK++R  + WF+K     T+E TI    R+  D++ NN P+ S WL  K
Sbjct: 49  KHYKQQRGKQKWFMKQ---NTEESTI---GRKLSDHKLNNTPD-SDWLQLK 92


>AB033091-1|BAA86579.1|  835|Homo sapiens KIAA1265 protein protein.
          Length = 835

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +2

Query: 299 QHYKKERRNKNWFVKAFQWYTQERTINQRNRRRFDYE-NNLPEFSAWLDNK 448
           +HYK++R  + WF+K     T+E TI    R+  D++ NN P+ S WL  K
Sbjct: 523 KHYKQQRGKQKWFMKQ---NTEESTI---GRKLSDHKLNNTPD-SDWLQLK 566


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,379,317
Number of Sequences: 237096
Number of extensions: 1583981
Number of successful extensions: 3752
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3752
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)