Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24m01
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.7  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   6.2  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       23   8.2  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
 Frame = +1

Query: 439  IKDLGLFVITRR------VVMDRYEKHENYMPGCVSPVVLSEITKTLTMKDQILQAGWLM 600
            + +L L+ + RR      ++  ++E H+N++P C    V  E+ +TL +  +I    W +
Sbjct: 1721 VSNLNLYRLGRRKRLGDCMIAAKFEPHDNWLPPCY--YVPKELEQTL-IDAKIPACHWNL 1777

Query: 601  FDHP 612
             D P
Sbjct: 1778 ADLP 1781


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 429 KTVDKGLGFVRDHTPSRNGSIREARKLHARMRVSCCLIG 545
           K V K +  +   TP+  G     R+LHA   +S    G
Sbjct: 788 KKVMKAINALAAFTPNIGGPCSSIRRLHANCAISVLRYG 826


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 250 YRVYQIFKDMLKDL 291
           + ++Q++ DMLKDL
Sbjct: 138 HNIHQLYSDMLKDL 151


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,473
Number of Sequences: 2352
Number of extensions: 13125
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)