Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24l24
         (358 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k...    27   1.1  
SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr 1|||M...    25   3.5  
SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|...    25   4.6  
SPAC1805.05 |cki3||serine/threonine protein kinase Cki3|Schizosa...    25   4.6  
SPBC27B12.07 |||conserved fungal protein|Schizosaccharomyces pom...    24   8.0  
SPAC458.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    24   8.0  

>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
           kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 836

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 231 YDTLDISLLTYDQRFRYLYCQNYYKFYF 148
           YDTLD   +     F YL  +N+ K YF
Sbjct: 449 YDTLDERKIRSLTTFEYLEIKNFQKIYF 476


>SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 757

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
 Frame = -2

Query: 225 TLDISLLTYDQRFRYLYCQNYYKFYFCT-RLS*REETLFIKLFC---PQ*ARKFVKYXDI 58
           +L  S  ++D     L CQN+Y  +  T  +S R E L +K      PQ    F  + D+
Sbjct: 584 SLSYSEQSFDSGVSILSCQNFYNIFHPTDPISYRVEPLVVKQMARLKPQKISHFRPHQDL 643

Query: 57  TKN 49
           + +
Sbjct: 644 SSS 646


>SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 712

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -3

Query: 296 TSELRGLRRSAIELYRLYPYPFTIHWTFH 210
           T   RG+R    +++    Y + ++W FH
Sbjct: 388 TISARGIRLVISQIFTAANYEYMVYWIFH 416


>SPAC1805.05 |cki3||serine/threonine protein kinase
           Cki3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 439

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 274 LSPRSSEVNALEQRGYLIGKKIGQGSY 354
           +S  SS  N +    Y +GKKIG+GS+
Sbjct: 1   MSTTSSHSNVVGVH-YRVGKKIGEGSF 26


>SPBC27B12.07 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 290

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = -3

Query: 287 LRGLRRSAIELYRLYPYPFTI--HWTFHYSLMTNVSDISTVKIIINSTFVRGSHKERKRY 114
           L G++  +I  +RL PY  ++     F+ S  T+  ++     ++N+       ++ + Y
Sbjct: 18  LHGIKVHSINTFRLIPYSLSLTKQIRFYASEGTDAGEMEKGLSVVNANHENRPFRDLEGY 77

Query: 113 L*NCFVHSK 87
             N F   K
Sbjct: 78  HFNTFTFLK 86


>SPAC458.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 340

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -2

Query: 231 YDTLDISLL--TYDQRFRYLYCQN 166
           YDTLDISLL   +D+    L C +
Sbjct: 267 YDTLDISLLLGLFDKSISMLNCHS 290


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,423,582
Number of Sequences: 5004
Number of extensions: 26071
Number of successful extensions: 66
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 107972554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)