SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24l24
         (358 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014987-1|AAH14987.1|  771|Homo sapiens UTP14, U3 small nucleol...    32   0.60 
BC009649-1|AAH09649.1|  771|Homo sapiens UTP14, U3 small nucleol...    32   0.60 
BC001149-1|AAH01149.1|  771|Homo sapiens UTP14, U3 small nucleol...    32   0.60 
AL034405-5|CAI42908.1|  771|Homo sapiens UTP14, U3 small nucleol...    32   0.60 
BC022515-1|AAH22515.1|  367|Homo sapiens testis-specific serine ...    30   2.4  
AY028964-1|AAK27734.1|  367|Homo sapiens testis-specific serine/...    30   2.4  
AB284522-1|BAF41973.1|  367|Homo sapiens testis-specific serine ...    30   2.4  
CR456587-1|CAG30473.1|  358|Homo sapiens STK22A protein.               28   7.4  
BC037781-1|AAH37781.1|  358|Homo sapiens testis-specific serine ...    28   7.4  
AK000675-1|BAA91319.1|  272|Homo sapiens protein ( Homo sapiens ...    28   7.4  
AF362953-1|AAK98531.1|  358|Homo sapiens testis specific serine/...    28   7.4  
AB284523-1|BAF41974.1|  358|Homo sapiens testis-specific serine ...    28   7.4  

>BC014987-1|AAH14987.1|  771|Homo sapiens UTP14, U3 small nucleolar
           ribonucleoprotein, homolog A (yeast) protein.
          Length = 771

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 293 SELRGLRRSAIELYRLYPYPFTIHWTFHYSLMTNV 189
           +E R +  +A ++ R+ PYPFT HW F  ++ T +
Sbjct: 670 NEKRNIHAAAHQV-RVLPYPFTHHWQFERTIQTPI 703


>BC009649-1|AAH09649.1|  771|Homo sapiens UTP14, U3 small nucleolar
           ribonucleoprotein, homolog A (yeast) protein.
          Length = 771

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 293 SELRGLRRSAIELYRLYPYPFTIHWTFHYSLMTNV 189
           +E R +  +A ++ R+ PYPFT HW F  ++ T +
Sbjct: 670 NEKRNIHAAAHQV-RVLPYPFTHHWQFERTIQTPI 703


>BC001149-1|AAH01149.1|  771|Homo sapiens UTP14, U3 small nucleolar
           ribonucleoprotein, homolog A (yeast) protein.
          Length = 771

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 293 SELRGLRRSAIELYRLYPYPFTIHWTFHYSLMTNV 189
           +E R +  +A ++ R+ PYPFT HW F  ++ T +
Sbjct: 670 NEKRNIHAAAHQV-RVLPYPFTHHWQFERTIQTPI 703


>AL034405-5|CAI42908.1|  771|Homo sapiens UTP14, U3 small nucleolar
           ribonucleoprotein, homolog A (yeast) protein.
          Length = 771

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 293 SELRGLRRSAIELYRLYPYPFTIHWTFHYSLMTNV 189
           +E R +  +A ++ R+ PYPFT HW F  ++ T +
Sbjct: 670 NEKRNIHAAAHQV-RVLPYPFTHHWQFERTIQTPI 703


>BC022515-1|AAH22515.1|  367|Homo sapiens testis-specific serine
           kinase 1B protein.
          Length = 367

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = +1

Query: 304 LEQRGYLIGKKIGQGSYA 357
           L++RGYL+G  +G+GSYA
Sbjct: 7   LKRRGYLLGINLGEGSYA 24


>AY028964-1|AAK27734.1|  367|Homo sapiens testis-specific
           serine/threonine kinase 1 protein.
          Length = 367

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = +1

Query: 304 LEQRGYLIGKKIGQGSYA 357
           L++RGYL+G  +G+GSYA
Sbjct: 7   LKRRGYLLGINLGEGSYA 24


>AB284522-1|BAF41973.1|  367|Homo sapiens testis-specific serine
           kinase 1 protein.
          Length = 367

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = +1

Query: 304 LEQRGYLIGKKIGQGSYA 357
           L++RGYL+G  +G+GSYA
Sbjct: 7   LKRRGYLLGINLGEGSYA 24


>CR456587-1|CAG30473.1|  358|Homo sapiens STK22A protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 292 EVNALEQRGYLIGKKIGQGSYA 357
           +   L ++GY++G  +G+GSYA
Sbjct: 3   DATVLRKKGYIVGINLGKGSYA 24


>BC037781-1|AAH37781.1|  358|Homo sapiens testis-specific serine
           kinase 2 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 292 EVNALEQRGYLIGKKIGQGSYA 357
           +   L ++GY++G  +G+GSYA
Sbjct: 3   DATVLRKKGYIVGINLGKGSYA 24


>AK000675-1|BAA91319.1|  272|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20668 fis, clone KAIA585. ).
          Length = 272

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -2

Query: 189 FRYLYCQNYYKFYFCTRLS*REETLFIKLFCPQ*ARKFVKYXDITKNLDIKNA 31
           F Y+ C+ Y + +   RL      +F++  CP  A+K  K      N DIK+A
Sbjct: 197 FMYVQCKVYVQLW--RRLKAYNRVIFVQN-CPDTAKKLEKNFSCNVNTDIKDA 246


>AF362953-1|AAK98531.1|  358|Homo sapiens testis specific
           serine/threonine kinase 2 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 292 EVNALEQRGYLIGKKIGQGSYA 357
           +   L ++GY++G  +G+GSYA
Sbjct: 3   DATVLRKKGYIVGINLGKGSYA 24


>AB284523-1|BAF41974.1|  358|Homo sapiens testis-specific serine
           kinase 2 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 292 EVNALEQRGYLIGKKIGQGSYA 357
           +   L ++GY++G  +G+GSYA
Sbjct: 3   DATVLRKKGYIVGINLGKGSYA 24


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,775,634
Number of Sequences: 237096
Number of extensions: 789672
Number of successful extensions: 5157
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5157
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -