Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24l21
         (509 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   1.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   5.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   5.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.4  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   9.8  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   9.8  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 137 IAVGIAGTLFLGYCVYF 187
           IAVG +G +F GY + F
Sbjct: 235 IAVGASGNVFAGYLLVF 251


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 188 DQQRRKDPLFKKKLRERRLN 247
           ++QR  D  F  K+R+ RLN
Sbjct: 477 EEQRNDDKPFLIKIRQYRLN 496


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 188 DQQRRKDPLFKKKLRERRLN 247
           ++QR  D  F  K+R+ RLN
Sbjct: 477 EEQRNDDKPFLIKIRQYRLN 496


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +2

Query: 131 LGIAVGIAGTLFLGYCVYFDQQRRKDPLFKKKLRER 238
           +G+A   A     GY    +QQ+++ PL +++ +++
Sbjct: 216 IGLAAYYAQVNLAGYIQEQNQQQQQQPLTQQQYQQQ 251


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 389  VEHLGQAVAVCGQTEQLLSVLQQTMPAPI 475
            +EH    + +C     L  VL+ + PAP+
Sbjct: 1088 LEHGAAGLRLCLHHRDLPCVLRASTPAPV 1116


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 115 NHKNNVRYSCRNC 153
           +H N  +Y C NC
Sbjct: 38  SHSNVYQYRCANC 50


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 499 QFLKKQMEDWSWHSLLKYTKQLFSLSTNSH 410
           Q L K ME   W S+++    +  + T+SH
Sbjct: 74  QLLPKLMEFDDWTSVMELHSWMTLMWTDSH 103


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,443
Number of Sequences: 438
Number of extensions: 2561
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)