Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24l14
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39851-12|AAV58884.1|  137|Caenorhabditis elegans Hypothetical p...   116   1e-26
U39851-11|AAV58883.1|  171|Caenorhabditis elegans Hypothetical p...   116   1e-26
U39851-10|AAM22035.1|  144|Caenorhabditis elegans Hypothetical p...   116   1e-26
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AF043693-2|AAB97535.2|  351|Caenorhabditis elegans Hypothetical ...    28   4.7  
AF039720-6|AAB96700.1|  347|Caenorhabditis elegans Hypothetical ...    28   4.7  
U70845-3|AAB09101.1|  244|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical ...    28   6.2  

>U39851-12|AAV58884.1|  137|Caenorhabditis elegans Hypothetical
           protein C23G10.2c protein.
          Length = 137

 Score =  116 bits (280), Expect = 1e-26
 Identities = 60/122 (49%), Positives = 77/122 (63%)
 Frame = +1

Query: 259 IITSPEIYQPVGPYSQAILADKTLYISGILGLDRDAQMVCGGAEAQTRQALDNLRHVLEA 438
           II+S      +GPYSQA+ A  T+Y+SG LGLD     +  G   QT Q+L NL  VL+A
Sbjct: 9   IISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKA 68

Query: 439 GGASLESVVKTTVLLASMDDFQTFNKVYAEYFPKACPARMTYEVSRLPLGAAVEIEAIAL 618
            GA   +VVKTTVLL ++ DF   N+VY +YF    PAR  Y+V+ LP G  VEIEA+A+
Sbjct: 69  AGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLVEIEAVAI 128

Query: 619 CG 624
            G
Sbjct: 129 AG 130


>U39851-11|AAV58883.1|  171|Caenorhabditis elegans Hypothetical
           protein C23G10.2a protein.
          Length = 171

 Score =  116 bits (280), Expect = 1e-26
 Identities = 60/122 (49%), Positives = 77/122 (63%)
 Frame = +1

Query: 259 IITSPEIYQPVGPYSQAILADKTLYISGILGLDRDAQMVCGGAEAQTRQALDNLRHVLEA 438
           II+S      +GPYSQA+ A  T+Y+SG LGLD     +  G   QT Q+L NL  VL+A
Sbjct: 43  IISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKA 102

Query: 439 GGASLESVVKTTVLLASMDDFQTFNKVYAEYFPKACPARMTYEVSRLPLGAAVEIEAIAL 618
            GA   +VVKTTVLL ++ DF   N+VY +YF    PAR  Y+V+ LP G  VEIEA+A+
Sbjct: 103 AGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLVEIEAVAI 162

Query: 619 CG 624
            G
Sbjct: 163 AG 164


>U39851-10|AAM22035.1|  144|Caenorhabditis elegans Hypothetical
           protein C23G10.2b protein.
          Length = 144

 Score =  116 bits (280), Expect = 1e-26
 Identities = 60/122 (49%), Positives = 77/122 (63%)
 Frame = +1

Query: 259 IITSPEIYQPVGPYSQAILADKTLYISGILGLDRDAQMVCGGAEAQTRQALDNLRHVLEA 438
           II+S      +GPYSQA+ A  T+Y+SG LGLD     +  G   QT Q+L NL  VL+A
Sbjct: 16  IISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKA 75

Query: 439 GGASLESVVKTTVLLASMDDFQTFNKVYAEYFPKACPARMTYEVSRLPLGAAVEIEAIAL 618
            GA   +VVKTTVLL ++ DF   N+VY +YF    PAR  Y+V+ LP G  VEIEA+A+
Sbjct: 76  AGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLVEIEAVAI 135

Query: 619 CG 624
            G
Sbjct: 136 AG 137


>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
           protein C25A8.4 protein.
          Length = 1067

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = -2

Query: 624 SAKSDGLDLHSCSQR*STDFVCHSSRASFRKIFCIDFVESLEVVHASQQNSSFHD 460
           S  +DGL++   SQ   +DF   + ++    I   D  + +E+V A+ Q S++ D
Sbjct: 476 STNADGLEISWTSQPMVSDFDKKNLKSFINDIVAADTAKMVEIVVATSQQSAYSD 530


>AF043693-2|AAB97535.2|  351|Caenorhabditis elegans Hypothetical
           protein C34B2.3 protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 102 TDSVIFLSFELLTYLHLKNKNELRRFC 182
           T+++  L FEL   L ++ KN+ ++FC
Sbjct: 78  TEAIKMLQFELFVLLTVEKKNQCKQFC 104


>AF039720-6|AAB96700.1|  347|Caenorhabditis elegans Hypothetical
           protein F33D11.7 protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 102 TDSVIFLSFELLTYLHLKNKNELRRFC 182
           T+++  L FEL   L ++ KN+ ++FC
Sbjct: 77  TEAIKMLQFELFVLLTVEKKNQCKQFC 103


>U70845-3|AAB09101.1|  244|Caenorhabditis elegans Hypothetical
           protein F22H10.4 protein.
          Length = 244

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 525 RIFS*SLPCSNDIRSQSTTVGSSCGDR 605
           +IF   +PC+ DI  +  T G SCG R
Sbjct: 150 QIFERQIPCTVDINYEQQTDGYSCGYR 176


>AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical
           protein F41A4.1 protein.
          Length = 696

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 305 KQF*RTRPYTFLEFSDWIEMHRWSAVVLKRRPVRLWT 415
           KQF    P +  EF+D  E H    +V+K  P  LWT
Sbjct: 592 KQFDFPAPKSDFEFNDNGEFHEGDVIVVKHSP-NLWT 627


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,553,373
Number of Sequences: 27780
Number of extensions: 268781
Number of successful extensions: 784
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)