Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24l03
         (422 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   0.46 
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   4.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   5.7  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   5.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   5.7  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   7.5  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   7.5  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 24.6 bits (51), Expect = 0.46
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 278 DNLNSLNISDYRLHSAPDIMNNR 210
           DNL +LN+++ RL    DI  NR
Sbjct: 171 DNLQTLNLTENRLRDINDIGLNR 193


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -1

Query: 326 NLLVKNIIHLPQYW 285
           N+  + +IH+P++W
Sbjct: 24  NVPAEELIHIPEHW 37


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 290 YWRNDNLNSLNISDYRLHSA 231
           + R D  NS+N ++ +LH++
Sbjct: 541 FGREDFWNSINFNENKLHTS 560


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 242 IYNQKYSKNLSYRFSNI 292
           I+N  Y+K L Y   NI
Sbjct: 323 IHNNNYNKKLYYNIINI 339


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 290 YWRNDNLNSLNISDYRLHSA 231
           + R D  NS+N ++ +LH++
Sbjct: 541 FGREDFWNSINFNENKLHTS 560


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 105 VLKKKIGNASRYEIE*EFYNFNMLVRCSDTY 197
           V+KK +   S       +  FN LV+C   Y
Sbjct: 96  VIKKLVAECSVISDANIYIRFNKLVKCFGKY 126


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 105 VLKKKIGNASRYEIE*EFYNFNMLVRCSDTY 197
           V+KK +   S       +  FN LV+C   Y
Sbjct: 96  VIKKLVAECSVISDANIYIRFNKLVKCFGKY 126


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,638
Number of Sequences: 438
Number of extensions: 2043
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)