Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24k23
(579 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099003-3|ABA00149.1| 759|Caenorhabditis elegans Hypothetical ... 29 3.2
Z46828-2|CAA86857.1| 434|Caenorhabditis elegans Hypothetical pr... 28 4.2
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 28 4.2
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 28 4.2
U43375-5|AAA83622.1| 1035|Caenorhabditis elegans Hypothetical pr... 28 4.2
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 28 4.2
Z81557-3|CAB04534.1| 99|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z66499-7|CAA91298.2| 407|Caenorhabditis elegans Hypothetical pr... 28 5.5
AC024799-8|AAW88387.1| 297|Caenorhabditis elegans Hypothetical ... 28 5.5
Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 27 7.3
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 27 7.3
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 27 7.3
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 27 9.6
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 27 9.6
AL132876-8|CAD21660.1| 829|Caenorhabditis elegans Hypothetical ... 27 9.6
AF067215-1|AAC17011.1| 495|Caenorhabditis elegans Hypothetical ... 27 9.6
AF036704-4|ABA00184.1| 352|Caenorhabditis elegans Hypothetical ... 27 9.6
AC025715-2|AAK68447.2| 439|Caenorhabditis elegans Hypothetical ... 27 9.6
>AF099003-3|ABA00149.1| 759|Caenorhabditis elegans Hypothetical
protein Y59C2A.3 protein.
Length = 759
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/66 (27%), Positives = 36/66 (54%)
Frame = +3
Query: 375 KVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQH 554
++ + +KF ++++K + KQ T + PLI S+ + +S + T + S +PE++
Sbjct: 120 QMSEEEKFA-YNRRKYESRKQRKTEER--PLIDIESLMPMLESKPDVATQEFSYAPEQRE 176
Query: 555 GDTKIS 572
D IS
Sbjct: 177 ADASIS 182
>Z46828-2|CAA86857.1| 434|Caenorhabditis elegans Hypothetical
protein R03D7.4 protein.
Length = 434
Score = 28.3 bits (60), Expect = 4.2
Identities = 23/95 (24%), Positives = 45/95 (47%)
Frame = +3
Query: 261 KRKLKRLFDITVRADDNLPKAICHDCLQQVSTLHLYAVKVEKTQKFLEFHKQKSKGEKQD 440
KR LKRL+D+ V + + A + C+++ + A ++ + L +++ KG +D
Sbjct: 23 KRALKRLYDLNV-SPEVFKSADTYQCVKRYESSPELAKYAKRVRDKLLGGRKREKGGGED 81
Query: 441 GTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPE 545
+ T L A E++ + +E KS S +
Sbjct: 82 DADIEHTALKKA-KKEEVNLDEEFAEAMKSGVSAQ 115
>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defective
protein 19,isoform a protein.
Length = 1783
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 402 EFHKQKSKGEKQ-DGTTNKMTPLIGALSVEDLKQSNKNSETAKSSP--SPERQH 554
E + S GE++ D + + PL+ + + D++ N+NS +A P + RQH
Sbjct: 1714 EIEEAYSLGEQEIDLAADSLAPLMQHVGMHDIRDINENSRSALLRPAENSSRQH 1767
>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defective
protein 19,isoform b protein.
Length = 1877
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 402 EFHKQKSKGEKQ-DGTTNKMTPLIGALSVEDLKQSNKNSETAKSSP--SPERQH 554
E + S GE++ D + + PL+ + + D++ N+NS +A P + RQH
Sbjct: 1808 EIEEAYSLGEQEIDLAADSLAPLMQHVGMHDIRDINENSRSALLRPAENSSRQH 1861
>U43375-5|AAA83622.1| 1035|Caenorhabditis elegans Hypothetical
protein K09C4.10 protein.
Length = 1035
Score = 28.3 bits (60), Expect = 4.2
Identities = 23/92 (25%), Positives = 39/92 (42%)
Frame = +3
Query: 285 DITVRADDNLPKAICHDCLQQVSTLHLYAVKVEKTQKFLEFHKQKSKGEKQDGTTNKMTP 464
D TV A DN+P + +Q YA VEK K + KS ++
Sbjct: 434 DDTVEATDNVPTLVNTTPTEQTKPTLSYAKIVEKFSK-TDQQPAKSDNSSPSPRAQRLEQ 492
Query: 465 LIGALSVEDLKQSNKNSETAKSSPSPERQHGD 560
+ A S + + NSE +++S +P+ + +
Sbjct: 493 NL-ATSANTIPCLSGNSENSENSYAPKHDNAE 523
>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
calcium channelalpha 1 subunit protein.
Length = 1783
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 402 EFHKQKSKGEKQ-DGTTNKMTPLIGALSVEDLKQSNKNSETAKSSP--SPERQH 554
E + S GE++ D + + PL+ + + D++ N+NS +A P + RQH
Sbjct: 1714 EIEEAYSLGEQEIDLAADSLAPLMQHVGMHDIRDINENSRSALLRPAENSSRQH 1767
>Z81557-3|CAB04534.1| 99|Caenorhabditis elegans Hypothetical
protein F59A1.6 protein.
Length = 99
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 48 GYLDIRFTQKKKTSKIRSCTI*HNFNFCNA-T*FKNRMNDFGN 173
GY+++ Q KT K + + +NFN N F+ ++ DFGN
Sbjct: 49 GYMNLACFQLHKTLKPKCMALVNNFNIGNVFDTFRPQLIDFGN 91
>Z66499-7|CAA91298.2| 407|Caenorhabditis elegans Hypothetical
protein T01B7.5a protein.
Length = 407
Score = 27.9 bits (59), Expect = 5.5
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 273 KRLFDITVRADDNLPKAI--CHDCLQQVSTLHLYAVKVEKTQKFLEFHKQKSKGEKQDGT 446
KR+FD+ V+ +N+ K I C Q V YA + T L ++ EK D
Sbjct: 181 KRIFDLVVKPLENVIKQIPKCALRSQLVYVAQTYASYLMNTAFLLNLRAKQFSNEKLDDP 240
Query: 447 TNKMTPLIGAL 479
+ P++ +L
Sbjct: 241 LVDIHPVVESL 251
>AC024799-8|AAW88387.1| 297|Caenorhabditis elegans Hypothetical
protein Y49C4A.2 protein.
Length = 297
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = -3
Query: 469 INGVILFVVPSCFSPFDFCL*NSKNFWVFSTFTAYKCRVETCCRQSWHIALGRLSSALTV 290
I+G I+F F F FC S + ST + C + TC W + + + + +
Sbjct: 127 ISGAIIFGGTEPFVLFGFC---SYQMEIPSTCRFFGCAINTCFNSFWSVHRTIIFTTIVI 183
Query: 289 IS 284
+S
Sbjct: 184 LS 185
>Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical
protein C41G7.4 protein.
Length = 407
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +3
Query: 249 SNEVKRKLKRL----FDITVRADDNLPKAICHDCLQQVSTLHLY 368
S++ K+ LK+L F I +A N+ + ICH C + + +Y
Sbjct: 266 SDDYKKFLKKLSYEEFFIDPKAKGNVGRMICHSCSPNLEIVRVY 309
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 27.5 bits (58), Expect = 7.3
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = +3
Query: 201 SCRLCLCTDVVKLKPLSNEVKRKLKRLFDITVRADDNLPKAICHDCLQQVSTLHLYAVKV 380
+C+ C T + LK + + ++KRL + A DNL K + + T++ K
Sbjct: 152 ACKECRQTHMDMLKRDMSRLLNQVKRLANRITEASDNLSKGV------DMMTMNCETTKA 205
Query: 381 EKTQKFLEFHKQKSKGE 431
E + F + + K E
Sbjct: 206 EIKEYFHRYQRDLKKKE 222
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 27.5 bits (58), Expect = 7.3
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = +3
Query: 201 SCRLCLCTDVVKLKPLSNEVKRKLKRLFDITVRADDNLPKAICHDCLQQVSTLHLYAVKV 380
+C+ C T + LK + + ++KRL + A DNL K + + T++ K
Sbjct: 152 ACKECRQTHMDMLKRDMSRLLNQVKRLANRITEASDNLSKGV------DMMTMNCETTKA 205
Query: 381 EKTQKFLEFHKQKSKGE 431
E + F + + K E
Sbjct: 206 EIKEYFHRYQRDLKKKE 222
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 27.5 bits (58), Expect = 7.3
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +3
Query: 240 KPLSNEVKRKLKRLFDITVRADDNLPKAICHDCLQQVSTLHLYAVKVE-KTQKFLEFHKQ 416
K +SNEV ++ + V+ + LP A H L L +VE KT + E
Sbjct: 276 KKVSNEVVKR------VAVKRE--LPSAEYHSVRYDERNLSLRKAQVELKTAQ--EAPAV 325
Query: 417 KSKGEKQDGTTNK-MTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQ 578
+ KG+ D T +T S E+ S+ NS+ ++ P P+ + T K+
Sbjct: 326 REKGDANDRTDKDCVTHPHDLQSTEEPTTSDSNSQVSEDIPPPKNKESGTPPLKE 380
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 489 DLKQSNKNSETAKSSPSPER 548
DL N +S+ KSSPSP+R
Sbjct: 398 DLSTGNPHSDAKKSSPSPKR 417
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 489 DLKQSNKNSETAKSSPSPER 548
DL N +S+ KSSPSP+R
Sbjct: 398 DLSTGNPHSDAKKSSPSPKR 417
>AL132876-8|CAD21660.1| 829|Caenorhabditis elegans Hypothetical
protein Y105E8A.9 protein.
Length = 829
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 372 VKVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQ 551
+++E Q+ +EF+ + G+ +DG +M P+I S+ S + E + S +P
Sbjct: 576 IQLELQQRSVEFNVILNLGDLRDGLLERM-PVITHNSLNAAAPSMIDEEVSAESGAPVVT 634
Query: 552 HGD 560
+GD
Sbjct: 635 NGD 637
>AF067215-1|AAC17011.1| 495|Caenorhabditis elegans Hypothetical
protein ZK380.2 protein.
Length = 495
Score = 27.1 bits (57), Expect = 9.6
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +3
Query: 306 DNLPKAICHDCLQQVSTLHLYAVK-VEKTQKFLEFHKQKSKG--EKQDGTTNKMTPLIGA 476
D P+A+C + +H Y+ K E+ +K LE + S+G +K D + K+ L
Sbjct: 424 DVKPRALCDYYRARFDLIHFYSSKEKERQRKELEQEMRISEGLRKKLDASFEKIDVL--K 481
Query: 477 LSVEDLKQ 500
+E+LKQ
Sbjct: 482 AEIENLKQ 489
>AF036704-4|ABA00184.1| 352|Caenorhabditis elegans Hypothetical
protein ZK185.5 protein.
Length = 352
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 270 LKRLFDITVRADDNLPKAICHDCLQQVSTLHLYAVKVEK 386
L+ L ++ + D+NLP + HD Q++ + V VE+
Sbjct: 301 LEALAEVHIVMDENLPLKVTHDIAQKLEQKLMMLVFVER 339
>AC025715-2|AAK68447.2| 439|Caenorhabditis elegans Hypothetical
protein Y38F2AR.6 protein.
Length = 439
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 276 RLFDITVRAD--DNLPKAICHDCLQQVSTLHLYAVKVEKTQKF 398
RLFD TVR+D ++ + ICH + V + + A E F
Sbjct: 315 RLFDTTVRSDNINHQIQIICHGSIDNVKNVEIIAGIEEMIDSF 357
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,797,402
Number of Sequences: 27780
Number of extensions: 259078
Number of successful extensions: 910
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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