Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24k21
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   3.1  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   3.1  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   3.1  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   5.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.2  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 144 LWSSSLDLHLALPCLHYKLLLHQE 73
           +W SS D++    CL ++  L+ E
Sbjct: 332 IWGSSDDINTKAKCLQFREYLNNE 355


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 299 QIRKTFLSFLPFDHNYMITKFRFNWR 222
           +I   F  F P   NY I  F F W+
Sbjct: 211 RITHNFFYFDPRYGNYNINGFNFQWK 236


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 496 YHISGIDIFL*HLHLVHNE*KFIAQKSWLQIQS 594
           + ISG    L ++HL H+   FIA +++  + S
Sbjct: 167 WSISGTVFDLINIHLFHDASNFIAMETFPSVYS 199


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 377 ALLPDAQTSTQSFDDDME 430
           ALL   QT++Q+ +DD+E
Sbjct: 182 ALLGRFQTTSQNLEDDVE 199


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 366 SNCSWRLHILSIINNKSIAQKYSNSKN 286
           S C+W +     IN K    ++S +KN
Sbjct: 68  SKCTWTITSYHRINLKCSLVEFSENKN 94


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,930
Number of Sequences: 438
Number of extensions: 4142
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)