Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24k17
         (620 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.      34   0.35 
X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.          32   1.4  
BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein.            32   1.4  
BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein.        32   1.4  
AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein p...    32   1.4  

>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
          Length = 1690

 Score = 34.3 bits (75), Expect = 0.35
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
 Frame = +2

Query: 374 EYIEDENV-EFPTCCARLRCVVEVNGERIVQTRGQPGELFPDKPWKGQQNEPNPA----V 538
           EY E E+V E PT         E+NG      +GQ GE    +P    +  P PA    +
Sbjct: 277 EYKEAESVTEGPTVTEETIAQTEINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGI 336

Query: 539 VGMSGIQ-QTPVGGEPQGQASPG 604
           +G  G+Q  T   G+P  +  PG
Sbjct: 337 MGPPGLQGPTGPPGDPGDRGPPG 359


>X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.
          Length = 1028

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 170 VLPALSAEDVSYQACVDKYSRKGYQP 247
           VL AL +E + Y   V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900


>BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein.
          Length = 1028

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 170 VLPALSAEDVSYQACVDKYSRKGYQP 247
           VL AL +E + Y   V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900


>BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein.
          Length = 1028

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 170 VLPALSAEDVSYQACVDKYSRKGYQP 247
           VL AL +E + Y   V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900


>AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein
            protein.
          Length = 1097

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 170  VLPALSAEDVSYQACVDKYSRKGYQP 247
            VL AL +E + Y   V KY RKGY+P
Sbjct: 944  VLQALGSEPIQYAVPVVKYDRKGYKP 969


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,843,561
Number of Sequences: 237096
Number of extensions: 2323667
Number of successful extensions: 10460
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10460
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)