Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24k12
         (615 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0305 + 2299681-2299860,2299940-2300260,2300346-2300600           29   3.9  
09_03_0009 + 11463049-11463063,11464136-11464492                       29   3.9  
07_03_1676 + 28584269-28584471,28585265-28585755,28587253-285873...    28   5.1  
08_01_0903 - 8897977-8899016,8899128-8899300,8901553-8901666,890...    28   6.8  

>11_01_0305 + 2299681-2299860,2299940-2300260,2300346-2300600
          Length = 251

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 511 LKTYISRWVAHPRCRC 464
           L T +  W AHPRCRC
Sbjct: 121 LTTALPPWEAHPRCRC 136


>09_03_0009 + 11463049-11463063,11464136-11464492
          Length = 123

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 202 SPHCSPTDSLSNSSTICNEATVMQSAHSR 116
           S  C    S S++STIC E+ V+   HSR
Sbjct: 78  SLRCRSKTSRSHTSTICRESRVIYGRHSR 106


>07_03_1676 +
           28584269-28584471,28585265-28585755,28587253-28587335,
           28587416-28587530,28587608-28587716,28587925-28587938,
           28588019-28588201,28588301-28588407,28588836-28589078,
           28589184-28589198
          Length = 520

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 223 NPSINPVGAGPPAATHRRPPLH 288
           NPS+ P  +  P   HR PPLH
Sbjct: 71  NPSLPPRTSSSPRKPHRLPPLH 92


>08_01_0903 -
           8897977-8899016,8899128-8899300,8901553-8901666,
           8901743-8901836,8901925-8902103,8902165-8902496,
           8913058-8913306
          Length = 726

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 79  LFRNIDEDDCKMIGNEH 129
           L R +D +DCK +GNEH
Sbjct: 609 LLRVLDLEDCKSLGNEH 625


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,529,198
Number of Sequences: 37544
Number of extensions: 421581
Number of successful extensions: 1004
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)