Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24k09
         (642 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001108-1|AAH01108.1|  290|Homo sapiens PIH1 domain containing ...   124   2e-28
AK000650-1|BAA91307.1|  290|Homo sapiens protein ( Homo sapiens ...   124   2e-28
BC019238-1|AAH19238.1|  315|Homo sapiens PIH1 domain containing ...    53   1e-06

>BC001108-1|AAH01108.1|  290|Homo sapiens PIH1 domain containing 1
           protein.
          Length = 290

 Score =  124 bits (300), Expect = 2e-28
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 1/183 (0%)
 Frame = +3

Query: 72  KKLLSSVDTVP-SRLVKPTPGFCVKTTRIPDNKKVFVNICQTDAIPCPRDITNDELMYIL 248
           K+L  +  T P S  ++P PGFC+KT       KVF+NIC + +IP P D+T +EL+ +L
Sbjct: 33  KELQQAQTTRPESTQIQPQPGFCIKTNS--SEGKVFINICHSPSIPPPADVTEEELLQML 90

Query: 249 SSEDPSSYRVPMSIGEGRTEHDKSGAPATAYDVAVNPEFFKKIEKDELFQTFFLTVVFEG 428
             ED + +R+PMS+GE   E D  G   TAYDVAVN +F+++++  +  +   +T+  EG
Sbjct: 91  E-EDQAGFRIPMSLGEPHAELDAKGQGCTAYDVAVNSDFYRRMQNSDFLRELVITIAREG 149

Query: 429 LQDKYQFEIDMQKFTILKNRKSIGTLQSHRIQIRDIQQTESKIKPPLIEEIKGKALSRSE 608
           L+DKY  +++  ++ ++KNR  +G++      IR  Q+   +    L     G+A S  E
Sbjct: 150 LEDKYNLQLN-PEWRMMKNRPFMGSISQQ--NIRSEQRPRIQELGDLYTPAPGRAESGPE 206

Query: 609 AAH 617
             H
Sbjct: 207 KPH 209


>AK000650-1|BAA91307.1|  290|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20643 fis, clone KAT02633. ).
          Length = 290

 Score =  124 bits (300), Expect = 2e-28
 Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 1/183 (0%)
 Frame = +3

Query: 72  KKLLSSVDTVP-SRLVKPTPGFCVKTTRIPDNKKVFVNICQTDAIPCPRDITNDELMYIL 248
           K+L  +  T P S  ++P PGFC+KT       KVF+NIC + +IP P D+T +EL+ +L
Sbjct: 33  KELQQAQTTRPESTQIQPQPGFCIKTNS--SEGKVFINICHSPSIPPPADVTEEELLQML 90

Query: 249 SSEDPSSYRVPMSIGEGRTEHDKSGAPATAYDVAVNPEFFKKIEKDELFQTFFLTVVFEG 428
             ED + +R+PMS+GE   E D  G   TAYDVAVN +F+++++  +  +   +T+  EG
Sbjct: 91  E-EDQAGFRIPMSLGEPHAELDAKGQGCTAYDVAVNSDFYRRMQNSDFLRELVITIAREG 149

Query: 429 LQDKYQFEIDMQKFTILKNRKSIGTLQSHRIQIRDIQQTESKIKPPLIEEIKGKALSRSE 608
           L+DKY  +++  ++ ++KNR  +G++      IR  Q+   +    L     G+A S  E
Sbjct: 150 LEDKYNLQLN-PEWRMMKNRPFMGSISQQ--NIRSEQRPRIQELGDLYTPAPGRAESGPE 206

Query: 609 AAH 617
             H
Sbjct: 207 KPH 209


>BC019238-1|AAH19238.1|  315|Homo sapiens PIH1 domain containing 2
           protein.
          Length = 315

 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
 Frame = +3

Query: 120 PTPGFCVKTTRI-PDNKKVFVNICQTDAIPCPRDITNDELMYILSSEDPSSYRVPMSIGE 296
           P P  C++T  + P  K +F+N+CQ   IP P+  T               + VP+++G+
Sbjct: 48  PEPQLCLQTRILKPKEKILFINLCQWTRIPAPQSTT---------------HPVPLTVGK 92

Query: 297 GRTEHDKSGAPATAYDVAVNPEFFKKIEKDELFQTFFLTVVFEGLQDKYQFEIDMQKFTI 476
                + S A  T  DVA NP+     EKD++ +   + +  + +++K+QF +    + I
Sbjct: 93  PEDTTEISDA-YTVIDVAYNPDVLHAAEKDQVKKNQLIQMAMKCIEEKFQFTLS-HSYHI 150

Query: 477 LKNRKSIGTLQSHRIQIRDIQQTESKIKPPLIEEI 581
            K R   G++Q  +  +  IQ     ++  +  E+
Sbjct: 151 TKFRIK-GSIQRMKQNLMGIQTDSIDLREKMRREL 184


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,418,982
Number of Sequences: 237096
Number of extensions: 2058843
Number of successful extensions: 7915
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7911
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)