Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24k08
(517 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0848 - 25334701-25334949,25335076-25335184,25335667-253357... 33 0.14
04_04_1653 + 35070026-35070064,35070358-35070408,35070490-350705... 32 0.24
04_04_0703 + 27398358-27398466,27398549-27398859,27399044-273991... 31 0.73
09_06_0215 - 21621889-21621949,21622275-21622333,21622442-216225... 30 0.96
02_04_0020 - 18956282-18956461,18956591-18956740,18957934-189580... 30 1.3
07_01_0793 - 6169661-6169936,6170942-6171025,6171473-6171590,617... 29 1.7
06_02_0041 + 10889741-10890092,10890161-10890235,10891139-108923... 29 2.2
05_02_0108 + 6681656-6681944,6682041-6682183,6682548-6682610 29 2.2
02_02_0139 + 7122880-7122979,7123328-7123560,7123961-7124032,712... 29 2.9
07_03_0050 + 12817959-12818281,12818604-12818688,12819144-128192... 28 3.9
09_06_0346 + 22435164-22435491,22435990-22436114,22436402-224365... 28 5.1
03_05_0559 - 25610474-25610951,25611149-25611890,25612355-256127... 27 6.8
08_02_0481 + 17636359-17636593,17638136-17638278,17638431-176385... 27 8.9
08_02_0479 + 17627605-17627839,17628965-17629107,17630018-176301... 27 8.9
04_04_0049 - 22356139-22357649,22357764-22357995 27 8.9
>06_03_0848 -
25334701-25334949,25335076-25335184,25335667-25335701,
25335793-25335843,25335941-25336018,25336214-25336351,
25336664-25336729,25337387-25337572
Length = 303
Score = 33.1 bits (72), Expect = 0.14
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 157 WTPPKGHVDPGETDWMTALRETKEEAGLCEDHLDI 261
W P G V+PGE + A+RE KEE G+ + +++
Sbjct: 147 WKFPTGVVEPGEDINLGAVREVKEETGIDTEFVEV 181
>04_04_1653 +
35070026-35070064,35070358-35070408,35070490-35070582,
35070758-35070855,35072437-35072551,35072628-35072720
Length = 162
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 157 WTPPKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTLNYEVNGEPKTVVYW 327
W P+G +D GE A RE +EE G+ + + T ++ V+ + K W
Sbjct: 26 WQMPQGGIDAGEDPREAAFRELREETGVTSAEMVAEVPVWLTYDFPVDVKEKLNARW 82
>04_04_0703 +
27398358-27398466,27398549-27398859,27399044-27399109,
27399196-27399258,27399304-27399444,27399535-27399612,
27399688-27399738,27399829-27399863,27399982-27400090,
27400235-27400441
Length = 389
Score = 30.7 bits (66), Expect = 0.73
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +1
Query: 157 WTPPKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTLNYEVNGEPKTVVYWLAK 336
W P G + E + A RE KEE G+ + +D+ N K+ ++++
Sbjct: 247 WKLPTGFILASEEIFTGATREVKEETGVDTEFVDVVA-FRHAHNVAFQ---KSDLFFICM 302
Query: 337 LKNPEQTVTL-SSEHQDMKWLSLQE 408
L+ + + +E Q KW+ L+E
Sbjct: 303 LRPTSNNIKIDETEIQAAKWMPLEE 327
>09_06_0215 -
21621889-21621949,21622275-21622333,21622442-21622582,
21622669-21622804,21623266-21623342,21623594-21623725,
21624915-21624938,21626147-21626365,21626401-21626718
Length = 388
Score = 30.3 bits (65), Expect = 0.96
Identities = 26/106 (24%), Positives = 53/106 (50%)
Frame = +1
Query: 31 LCXN*NKIEVMSSLRAAGLVIFRNYNQIIQFLLLQTSYGEHHWTPPKGHVDPGETDWMTA 210
+C + ++ + G ++ + ++ ++ +YG WT P G+++ GE+ A
Sbjct: 217 VCSSCGRVHYENPKMVVGCLVEHDNKVLLCRRKIEPAYGL--WTLPAGYLEVGESAAEGA 274
Query: 211 LRETKEEAGLCEDHLDIYKDINKTLNYEVNGEPKTVVYWLAKLKNP 348
RET EEA C D ++I + L+ + G+ + + + A+LK P
Sbjct: 275 SRETLEEA--CAD-VEILSPFAQ-LDIPLIGQ--SYIIFRARLKTP 314
>02_04_0020 -
18956282-18956461,18956591-18956740,18957934-18958017,
18958283-18958403,18958525-18958604
Length = 204
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Frame = +1
Query: 166 PKGHVDPGETDWMTALRETKEEAGL--CEDHLDIYKDINKTLNYEVNGEPKTVV--YWLA 333
PKG + E + A RE EEAG+ + + + K+ + + + P+ Y A
Sbjct: 66 PKGGWEDDEEVYEAASREAMEEAGVKGIVNRTTLGHWVFKSKSSQNSSSPRGACKGYIFA 125
Query: 334 KLKNPEQTVTLSSEHQDMKWLSLQEAQEISKYEDMRQLLAEFYEK 468
E +W+S EA ++ +YE MR+ L E+
Sbjct: 126 MEVTEELESWPEQATHGRRWVSPGEAYQLCRYEWMREALTALLER 170
>07_01_0793 -
6169661-6169936,6170942-6171025,6171473-6171590,
6172917-6172987
Length = 182
Score = 29.5 bits (63), Expect = 1.7
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = +1
Query: 103 YNQIIQFLLLQTSYGEHHWTPPKGHVDPGETDWMTALRETKEEAGLCEDHLDI---YKDI 273
+ ++++ L++ + G P KG + ET A RE EEAG+ D + + Y
Sbjct: 42 HKKLVEVLMINSQSGSGLLFP-KGGWENDETVEEAAAREAIEEAGVRGDLVQLLGFYDFK 100
Query: 274 NKTLNYEVNGEPKTVVYWLAKLKNPEQTVTLSSEHQDMKWLSLQEAQEISKYEDMRQLL 450
+KT + E A E + WL+L EA E S+Y +R+ L
Sbjct: 101 SKTHQDKFCPEGMCRAAVFALRVKEELASWPEQSTRKRTWLTLSEAVERSRYPWVREAL 159
>06_02_0041 +
10889741-10890092,10890161-10890235,10891139-10892341,
10892970-10893253,10893343-10893459,10894126-10894388,
10894557-10894725,10894838-10895110,10895674-10895718,
10896472-10896591,10896926-10896987,10897296-10897318,
10897911-10898128
Length = 1067
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 310 KTVV-YWLAKLKNPEQTVTLSSEHQDMKWLSLQEAQEISKYEDMRQLLAEFYEKCK 474
KT++ W A+ PEQ V L E +MK L E+ ED + ++E + K
Sbjct: 765 KTIMALWKARSLTPEQKVQLVEEESEMKDLQNNESDSFLGIEDAK--MSEVFSSTK 818
>05_02_0108 + 6681656-6681944,6682041-6682183,6682548-6682610
Length = 164
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 166 PKGHVDPGETD-WMTALRETKEEAGL 240
P G V+ G+ D TALRE KEE GL
Sbjct: 102 PGGKVEEGDADATATALREAKEEIGL 127
>02_02_0139 +
7122880-7122979,7123328-7123560,7123961-7124032,
7124257-7124334,7124529-7124579,7124654-7124703,
7124807-7124915,7125023-7125223
Length = 297
Score = 28.7 bits (61), Expect = 2.9
Identities = 21/104 (20%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = +1
Query: 157 WTPPKGHVDPGETDWMTALRETKEEAGLCEDHLD-IYKDINKTLNYEVNGEPKTVVYWLA 333
W P G +D E + A+RE +EE G ++ + D+ + K+ + ++
Sbjct: 152 WKIPTGFIDKFEDLFSGAIREVREETGNSTFQIESCFLDVVAFRHAHQVLFDKSDILFIC 211
Query: 334 KLKNPEQTVTL-SSEHQDMKWLSLQE--AQEISKYEDMRQLLAE 456
LK +++ SE + +W+ ++E +Q + ++M + + +
Sbjct: 212 TLKPLSSDISIDESEIEAARWMPVEEFVSQPFHQEDEMSRAITD 255
>07_03_0050 +
12817959-12818281,12818604-12818688,12819144-12819213,
12819900-12819970,12820417-12820440
Length = 190
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 166 PKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTLNY--EVNGEPK 312
P HV D ++ + KE G+ D+Y+D TLNY ++ PK
Sbjct: 80 PLTHVINLRLDILSFRQNEKESLGVAWARDDLYEDYENTLNYSSKIKAHPK 130
>09_06_0346 +
22435164-22435491,22435990-22436114,22436402-22436514,
22436919-22437023,22437147-22437531,22437645-22437776,
22437980-22438450,22438550-22439278,22439579-22439767
Length = 858
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/71 (25%), Positives = 41/71 (57%)
Frame = +1
Query: 214 RETKEEAGLCEDHLDIYKDINKTLNYEVNGEPKTVVYWLAKLKNPEQTVTLSSEHQDMKW 393
R T+E+ L ++HL IY ++ K N ++ + +++ + + E+ T+ E Q K
Sbjct: 414 RLTREKVSLEKEHLQIYNELQKA-NEQIMELERKLMHANSLM---EELQTVQGELQRQKD 469
Query: 394 LSLQEAQEISK 426
+++EA+++S+
Sbjct: 470 NAVKEAEKMSQ 480
>03_05_0559 -
25610474-25610951,25611149-25611890,25612355-25612744,
25613041-25613099,25613186-25613326,25613449-25613545,
25614999-25615185
Length = 697
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -3
Query: 413 CASCN-ESHFISWCSDERVTVCSGFLSF 333
C SC HFI C ER T SG++ +
Sbjct: 177 CRSCGVPGHFIQHCQQERKTPPSGYVCY 204
>08_02_0481 +
17636359-17636593,17638136-17638278,17638431-17638550,
17638916-17639116
Length = 232
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 166 PKGHVDPGETD-WMTALRETKEEAGL 240
P G + G+ D TALRE KEE GL
Sbjct: 84 PGGKAEEGDADDAATALREAKEEIGL 109
>08_02_0479 +
17627605-17627839,17628965-17629107,17630018-17630137,
17630497-17630721
Length = 240
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 166 PKGHVDPGETD-WMTALRETKEEAGL 240
P G + G+ D TALRE KEE GL
Sbjct: 84 PGGKAEEGDADDAATALREAKEEIGL 109
>04_04_0049 - 22356139-22357649,22357764-22357995
Length = 580
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 112 IIQFLLLQTSYGEHHWTPPKGHVDPGETDWMTA 210
++ LL+ +G WTP GH +T W++A
Sbjct: 38 VMVVLLMAVLFGAR-WTPSGGHGGGADTSWVSA 69
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,857,653
Number of Sequences: 37544
Number of extensions: 217990
Number of successful extensions: 595
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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