Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24k08
(517 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical ... 162 2e-40
U55855-1|AAA98017.1| 188|Caenorhabditis elegans Nudix family pr... 43 1e-04
Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 30 0.85
AF067946-2|AAC17685.1| 223|Caenorhabditis elegans Nudix family ... 30 0.85
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 2.0
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 29 2.0
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 2.0
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 2.0
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 2.0
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 2.0
Z35641-2|CAA84707.2| 389|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF269063-1|AAG36940.1| 389|Caenorhabditis elegans core1 UDP-gal... 29 2.6
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 28 3.4
U37429-12|AAA79353.1| 274|Caenorhabditis elegans Alkylguanine d... 28 3.4
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 28 3.4
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 28 3.4
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 28 3.4
Z77666-13|CAB01229.2| 315|Caenorhabditis elegans Hypothetical p... 27 6.0
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 6.0
U80023-6|AAG24045.1| 306|Caenorhabditis elegans Serpentine rece... 27 6.0
U43375-5|AAA83622.1| 1035|Caenorhabditis elegans Hypothetical pr... 27 6.0
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 6.0
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 27 8.0
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 27 8.0
>AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical
protein Y37H9A.6 protein.
Length = 138
Score = 162 bits (393), Expect = 2e-40
Identities = 73/130 (56%), Positives = 96/130 (73%)
Frame = +1
Query: 70 LRAAGLVIFRNYNQIIQFLLLQTSYGEHHWTPPKGHVDPGETDWMTALRETKEEAGLCED 249
++AAGLVI+R I+FLLLQ SY HHWTPPKGHVDPGE +W A+RETKEEA + ++
Sbjct: 3 VKAAGLVIYRKLAGKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKE 62
Query: 250 HLDIYKDINKTLNYEVNGEPKTVVYWLAKLKNPEQTVTLSSEHQDMKWLSLQEAQEISKY 429
L I++D ++TL YE G+PK+V YWLAKL NP+ V LS EHQ+ KW L++A +I+ Y
Sbjct: 63 QLTIHEDCHETLFYEAKGKPKSVKYWLAKLNNPDD-VQLSHEHQNWKWCELEDAIKIADY 121
Query: 430 EDMRQLLAEF 459
+M LL +F
Sbjct: 122 AEMGSLLRKF 131
>U55855-1|AAA98017.1| 188|Caenorhabditis elegans Nudix family
protein 3 protein.
Length = 188
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +1
Query: 166 PKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTLNYEVNGEPKTVVYWLAKLKN 345
P G +DPGET TALRET EE G+ + ++I+ + + + + +V +++ +
Sbjct: 35 PGGRMDPGETTTETALRETFEEIGVNAESVEIWGHLKSVIRRQADFNVTPIVGYISDERV 94
Query: 346 PEQTVTLSSEHQDMKWLSLQE 408
E V S E Q + + + E
Sbjct: 95 LENLVVNSDEVQAVFTIPIDE 115
>Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical
protein T26E3.2 protein.
Length = 365
Score = 35.5 bits (78), Expect = 0.023
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 79 AGLVIFRNYNQIIQFLLLQTSYGEHH--WTPPKGHVDPGETDWMTALRETKEEAGLCEDH 252
A +I RN + LL+Q + W P G V+ GET +RE KEE G D
Sbjct: 76 AAAIILRNQGDDTEVLLIQEAKKSCRGKWYMPAGRVEAGETIEEAVVREVKEETGYSCDV 135
Query: 253 LDI 261
+++
Sbjct: 136 VEL 138
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/85 (18%), Positives = 32/85 (37%)
Frame = +1
Query: 190 ETDWMTALRETKEEAGLCEDHLDIYKDINKTLNYEVNGEPKTVVYWLAKLKNPEQTVTLS 369
E W+ +L K+ G + + + +D + +G P ++W E
Sbjct: 139 EAKWLNSLYRDKKNGGQMDSWIGLRRDCDNVTYIWTDGSPTDCLWWQPDYPKSEFAEFSC 198
Query: 370 SEHQDMKWLSLQEAQEISKYEDMRQ 444
+ WL A +Y+DM++
Sbjct: 199 VTIWETDWLYDNPAYIPGQYDDMKE 223
>AF067946-2|AAC17685.1| 223|Caenorhabditis elegans Nudix family
protein 2 protein.
Length = 223
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 166 PKGHVDPGETDWMTALRETKEEAG 237
P G +D GET A+RE KEE G
Sbjct: 109 PAGLIDAGETAQQAAIRELKEETG 132
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 283 LNYEVNGEPKTVVYWLAKLKNPEQTVTLSSEHQDMKWLSL 402
L +V GEP+ + W + K E + + +EH+D L+L
Sbjct: 3836 LKCKVKGEPRPKIKWTKEGKEVEMSARVRAEHKDDGTLTL 3875
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 283 LNYEVNGEPKTVVYWLAKLKNPEQTVTLSSEHQDMKWLSL 402
L +V GEP+ + W + K E + + +EH+D L+L
Sbjct: 3196 LKCKVKGEPRPKIKWTKEGKEVEMSARVRAEHKDDGTLTL 3235
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 283 LNYEVNGEPKTVVYWLAKLKNPEQTVTLSSEHQDMKWLSL 402
L +V GEP+ + W + K E + + +EH+D L+L
Sbjct: 3836 LKCKVKGEPRPKIKWTKEGKEVEMSARVRAEHKDDGTLTL 3875
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 283 LNYEVNGEPKTVVYWLAKLKNPEQTVTLSSEHQDMKWLSL 402
L +V GEP+ + W + K E + + +EH+D L+L
Sbjct: 3836 LKCKVKGEPRPKIKWTKEGKEVEMSARVRAEHKDDGTLTL 3875
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 283 LNYEVNGEPKTVVYWLAKLKNPEQTVTLSSEHQDMKWLSL 402
L +V GEP+ + W + K E + + +EH+D L+L
Sbjct: 3196 LKCKVKGEPRPKIKWTKEGKEVEMSARVRAEHKDDGTLTL 3235
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 283 LNYEVNGEPKTVVYWLAKLKNPEQTVTLSSEHQDMKWLSL 402
L +V GEP+ + W + K E + + +EH+D L+L
Sbjct: 3836 LKCKVKGEPRPKIKWTKEGKEVEMSARVRAEHKDDGTLTL 3875
>Z35641-2|CAA84707.2| 389|Caenorhabditis elegans Hypothetical
protein C38H2.2 protein.
Length = 389
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +1
Query: 148 EHHWTPPKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTLNY 291
EHH +P GHVDP W + C D+ + +N L Y
Sbjct: 292 EHHLSP--GHVDPKFWFWQYTYYPMDQGPTCCSDYAVSFHYVNPNLMY 337
>AF269063-1|AAG36940.1| 389|Caenorhabditis elegans core1
UDP-galactose:N-acetylgalactosamine-alpha-R beta
1,3-galactosyltransferase protein.
Length = 389
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +1
Query: 148 EHHWTPPKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTLNY 291
EHH +P GHVDP W + C D+ + +N L Y
Sbjct: 292 EHHLSP--GHVDPKFWFWQYTYYPMDQGPTCCSDYAVSFHYVNPNLMY 337
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 124 LLLQTSYGE-HHWTPPKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTLNYEVN 300
+L+Q+ + + +W PKG ++ E A+RET EE G IY + K +N
Sbjct: 256 VLVQSYFAKGKNWGFPKGKINQAEPPRDAAIRETFEETGF---DFGIYSEKEKKFQRFIN 312
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 124 LLLQTSYGE-HHWTPPKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTLNYEVN 300
+L+Q+ + + +W PKG ++ E A+RET EE G IY + K +N
Sbjct: 279 VLVQSYFAKGKNWGFPKGKINQAEPPRDAAIRETFEETGF---DFGIYSEKEKKFQRFIN 335
>U37429-12|AAA79353.1| 274|Caenorhabditis elegans Alkylguanine dna
alkyltransferaseprotein 2 protein.
Length = 274
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 250 HLDIYKDINKTLNYEVNGEPKTVVYWLAKLKNPEQTVTLSSEHQDMKWLSLQEAQE 417
H+ K++ + N + +P VV ++ P ++ S EH M + LQE +E
Sbjct: 44 HVGRAKNVKEIFNCILQTQPLPVVQPCHPVRQPRESFYSSHEHDPMDEVLLQEVKE 99
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 124 LLLQTSYGE-HHWTPPKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTLNYEVN 300
+L+Q+ + + +W PKG ++ E A+RET EE G IY + K +N
Sbjct: 240 VLVQSYFAKGKNWGFPKGKINQAEPPRDAAIRETFEETGF---DFGIYSEKEKKFQRFIN 296
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 124 LLLQTSYGE-HHWTPPKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTLNYEVN 300
+L+Q+ + + +W PKG ++ E A+RET EE G IY + K +N
Sbjct: 256 VLVQSYFAKGKNWGFPKGKINQAEPPRDAAIRETFEETGF---DFGIYSEKEKKFQRFIN 312
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 124 LLLQTSYGE-HHWTPPKGHVDPGETDWMTALRETKEEAGLCEDHLDIYKDINKTLNYEVN 300
+L+Q+ + + +W PKG ++ E A+RET EE G IY + K +N
Sbjct: 279 VLVQSYFAKGKNWGFPKGKINQAEPPRDAAIRETFEETGF---DFGIYSEKEKKFQRFIN 335
>Z77666-13|CAB01229.2| 315|Caenorhabditis elegans Hypothetical
protein K08E7.6 protein.
Length = 315
Score = 27.5 bits (58), Expect = 6.0
Identities = 27/93 (29%), Positives = 33/93 (35%), Gaps = 1/93 (1%)
Frame = +1
Query: 142 YGEHHWTPPKGHVDPGETDWMTALRE-TKEEAGLCEDHLDIYKDINKTLNYEVNGEPKTV 318
Y E W PK DWM+ L E E D D DI E PK
Sbjct: 135 YAEFSWAEPKRRSRGPVPDWMSGLAEIMMSEQDTKADDADSASDI-----MEATYGPKAK 189
Query: 319 VYWLAKLKNPEQTVTLSSEHQDMKWLSLQEAQE 417
KL+ E + H DMK L++ +E
Sbjct: 190 ---RLKLQRTEMQLHQLQLHLDMKQRELKQERE 219
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 27.5 bits (58), Expect = 6.0
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 178 VDPGETDWMTALRETKEEAG-LCEDHLDIYKDINKTLNYEVNGEPKTVVYWLAKLKNPEQ 354
V PG +RE +++ +C++HL IY D+ + + + +Y + L +
Sbjct: 2102 VFPGIHYTANQMRELRQQLSTVCDEHLLIYSDVQGEMG-SMWLDKVLQLYQITNLNHGLM 2160
Query: 355 TVTLSSEHQDMKWLSLQEAQEISKYEDMRQLLAEFYEKCKSR*SNY 492
V S + M W L +A E ++E++ + K S+ S Y
Sbjct: 2161 LVGSSGSGKTMAWKVLLKALE--RWENVEGVAHVIDAKAMSKDSLY 2204
>U80023-6|AAG24045.1| 306|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 29 protein.
Length = 306
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 59 LCLL*EPQVWLFSEIIIKLYNSYYCKHPTENII 157
LCLL VW+ S I + Y Y + P +N++
Sbjct: 92 LCLLEYNLVWMISSYIFRYYILYVREPPIKNLV 124
>U43375-5|AAA83622.1| 1035|Caenorhabditis elegans Hypothetical
protein K09C4.10 protein.
Length = 1035
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 217 ETKEEAGLCEDHLDIYKDINKTLNYEVNGEPKTVV-YWLAKLKNP 348
+ K E H+D+ INK L + +N + V Y L KL P
Sbjct: 17 DLKREMTYVSYHMDLGNGINKELRFSLNNKNTYVTHYMLEKLPRP 61
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 27.5 bits (58), Expect = 6.0
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 178 VDPGETDWMTALRETKEEAG-LCEDHLDIYKDINKTLNYEVNGEPKTVVYWLAKLKNPEQ 354
V PG +RE +++ +C++HL IY D+ + + + +Y + L +
Sbjct: 2102 VFPGIHYTANQMRELRQQLSTVCDEHLLIYSDVQGEMG-SMWLDKVLQLYQITNLNHGLM 2160
Query: 355 TVTLSSEHQDMKWLSLQEAQEISKYEDMRQLLAEFYEKCKSR*SNY 492
V S + M W L +A E ++E++ + K S+ S Y
Sbjct: 2161 LVGSSGSGKTMAWKVLLKALE--RWENVEGVAHVIDAKAMSKDSLY 2204
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 205 TALRETKEEAGLCEDHLDIYKDINKTLNYEVNGEPKTVVYWL---AKLKNPEQTVTL 366
T+ RET + + LD+ K+ TL+Y +N P+ + +L + + P TV +
Sbjct: 606 TSFRETGTRT-IINEALDVLKECFCTLSYNINFHPEVALNYLKDEMEYRTPNFTVNM 661
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 205 TALRETKEEAGLCEDHLDIYKDINKTLNYEVNGEPKTVVYWL---AKLKNPEQTVTL 366
T+ RET + + LD+ K+ TL+Y +N P+ + +L + + P TV +
Sbjct: 606 TSFRETGTRT-IINEALDVLKECFCTLSYNINFHPEVALNYLKDEMEYRTPNFTVNM 661
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,929,940
Number of Sequences: 27780
Number of extensions: 217329
Number of successful extensions: 663
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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