Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24k06
(519 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC823.07 |||GPI-phospholipase A2 activity regulator |Schizosac... 81 1e-16
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 29 0.32
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 29 0.55
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 2.9
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 26 2.9
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 26 3.9
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 25 6.8
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 21 8.4
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 25 9.0
>SPAC823.07 |||GPI-phospholipase A2 activity regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 331
Score = 80.6 bits (190), Expect = 1e-16
Identities = 53/153 (34%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Frame = +2
Query: 68 TVFILSCKLS---QLSASEGDRLYIYKDCLKRCISRNCDENGLLFRQNTTIQQDFWCRLF 238
T+F L LS Q+SAS GD +Y C+ RCI C N + T + +LF
Sbjct: 8 TIFFLFTALSLFRQISASAGDLHPVYVSCVNRCIENKCHGN-----PSDTSKLPLDLKLF 62
Query: 239 SWRCIDECKYHCMWSAVKKLENAGRQVVKFHGKWPFKRIMGMQEPASVFASLLNLLANAY 418
W C C Y C +A ++HGKW F R+ G+QE SVF S+LN + +
Sbjct: 63 RWDCGSNCGYECEITAENYFAAHNLPSQQYHGKWYFIRVFGIQELFSVFFSMLNFMIHYN 122
Query: 419 MYSKLRTEFSIKSRPMVLLWHLFALVCMNAXVW 517
Y +R P L +A+V MNA VW
Sbjct: 123 GYHIMRRCIP-DEHPAKRLCLSWAIVGMNAWVW 154
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 29.5 bits (63), Expect = 0.32
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +2
Query: 95 SQLSASEGDR-LYIYKDCLKRCI 160
S+LS E R LYIYKD L RC+
Sbjct: 333 SELSVDEMKRQLYIYKDALSRCV 355
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 28.7 bits (61), Expect = 0.55
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -3
Query: 250 ASPTEEPTPEILLYCCILSEQKAIFITIPRYASFETIFIYVQAIAFARR*LTQ 92
A+ EEP PE+ + ++I I P Y++F+ I ++++F + L Q
Sbjct: 435 ATEAEEPEPEVQFGFKAKLDGESIIIEHPTYSAFQQIIDRTKSLSFESQNLEQ 487
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 26.2 bits (55), Expect = 2.9
Identities = 11/48 (22%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 240 LKSLHQKSC-CIVVFCLNKRPFSSQFLDMHRLRQSLYMYKRSPSLADN 100
+ + + K+C C + N + + +H+L +++ +R PS AD+
Sbjct: 70 IPNTNPKNCQCYLYHSTNSQLEPLEVFHLHKLHSAVFTSRRDPSFADD 117
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 26.2 bits (55), Expect = 2.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 353 IMGMQEPASVFASLLNLLANAYMYSKLR 436
I+GM++ S FA N ++N+Y YS R
Sbjct: 30 ILGMRDFQSRFADRYNPISNSYSYSAWR 57
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 353 IMGMQEPASVFASLLNLLANAYMYSKLR 436
I+GM++ S FA N + N+Y YS R
Sbjct: 30 ILGMRDFQSRFADRYNPITNSYSYSAWR 57
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 990
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 77 ILSCKLSQLSASEGDRLYIYKDCLKRCI 160
+L+C L+QL S L I+++ LK C+
Sbjct: 638 LLNCILAQLQPSLYPNLEIFENVLKSCL 665
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 21.4 bits (43), Expect(2) = 8.4
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 278 WSAVKKLENAGRQVVKFHGKWPFKRIM 358
WS +K+ + + K +GKW F+++M
Sbjct: 533 WSQHRKIIDT-LEGSKKYGKWAFRKMM 558
Score = 21.4 bits (43), Expect(2) = 8.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 365 QEPASVFASLLNL 403
Q P VFAS+LNL
Sbjct: 590 QVPRQVFASMLNL 602
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 44 GSLKITLVTVFILSCKLSQLSASEGDRLYIYKDCLK 151
GS +L+T F+L+CK D YI C K
Sbjct: 159 GSNVDSLITSFVLTCKNLHRKRYSSDMEYIAFSCSK 194
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,185,322
Number of Sequences: 5004
Number of extensions: 46560
Number of successful extensions: 133
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 210309424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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