Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24k06
         (519 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069668-1|AAL39813.1|  330|Drosophila melanogaster LD44494p pro...   123   1e-28
AE013599-200|AAM70808.1|  326|Drosophila melanogaster CG3271-PA,...   123   1e-28
AE013599-199|AAM70807.1|  330|Drosophila melanogaster CG3271-PB,...   123   1e-28

>AY069668-1|AAL39813.1|  330|Drosophila melanogaster LD44494p
           protein.
          Length = 330

 Score =  123 bits (297), Expect = 1e-28
 Identities = 60/161 (37%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
 Frame = +2

Query: 41  MGSLKITLVTVFILSCKLSQLSASEGDRLYIYKDCLKRCISRNCDENGLLFRQNTT--IQ 214
           M S  ++ + V +L   ++   AS GDR   + +C + C   NC  +GL  ++      Q
Sbjct: 1   MSSRSLSAI-VLLLGALVTACLASNGDRTQFFHNCRQNCERTNCSADGLEIQEQAVKFYQ 59

Query: 215 QDFWCRLFSWRCIDECKYHCMWSAVKKLENAGRQVVKFHGKWPFKRIMGMQEPASVFASL 394
           Q  + RLF W C DEC+Y CMW  V      G  + +F+GKWPF R++GMQEPASV  S 
Sbjct: 60  QSVFDRLFQWSCADECQYGCMWRTVFAFFERGWPIPQFYGKWPFLRLLGMQEPASVIFSC 119

Query: 395 LNLLANAYMYSKLRTEFSIKSRPMVLLWHLFALVCMNAXVW 517
           LN + +  +  K R E    S P  +L H+FA+  +N  +W
Sbjct: 120 LNFVVHLRLLRKFRREVRPDS-PCYMLTHIFAVTSLNGWIW 159


>AE013599-200|AAM70808.1|  326|Drosophila melanogaster CG3271-PA,
           isoform A protein.
          Length = 326

 Score =  123 bits (297), Expect = 1e-28
 Identities = 60/161 (37%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
 Frame = +2

Query: 41  MGSLKITLVTVFILSCKLSQLSASEGDRLYIYKDCLKRCISRNCDENGLLFRQNTT--IQ 214
           M S  ++ + V +L   ++   AS GDR   + +C + C   NC  +GL  ++      Q
Sbjct: 1   MSSRSLSAI-VLLLGALVTACLASNGDRTQFFHNCRQNCERTNCSADGLEIQEQAVKFYQ 59

Query: 215 QDFWCRLFSWRCIDECKYHCMWSAVKKLENAGRQVVKFHGKWPFKRIMGMQEPASVFASL 394
           Q  + RLF W C DEC+Y CMW  V      G  + +F+GKWPF R++GMQEPASV  S 
Sbjct: 60  QSVFDRLFQWSCADECQYGCMWRTVFAFFERGWPIPQFYGKWPFLRLLGMQEPASVIFSC 119

Query: 395 LNLLANAYMYSKLRTEFSIKSRPMVLLWHLFALVCMNAXVW 517
           LN + +  +  K R E    S P  +L H+FA+  +N  +W
Sbjct: 120 LNFVVHLRLLRKFRREVRPDS-PCYMLTHIFAVTSLNGWIW 159


>AE013599-199|AAM70807.1|  330|Drosophila melanogaster CG3271-PB,
           isoform B protein.
          Length = 330

 Score =  123 bits (297), Expect = 1e-28
 Identities = 60/161 (37%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
 Frame = +2

Query: 41  MGSLKITLVTVFILSCKLSQLSASEGDRLYIYKDCLKRCISRNCDENGLLFRQNTT--IQ 214
           M S  ++ + V +L   ++   AS GDR   + +C + C   NC  +GL  ++      Q
Sbjct: 1   MSSRSLSAI-VLLLGALVTACLASNGDRTQFFHNCRQNCERTNCSADGLEIQEQAVKFYQ 59

Query: 215 QDFWCRLFSWRCIDECKYHCMWSAVKKLENAGRQVVKFHGKWPFKRIMGMQEPASVFASL 394
           Q  + RLF W C DEC+Y CMW  V      G  + +F+GKWPF R++GMQEPASV  S 
Sbjct: 60  QSVFDRLFQWSCADECQYGCMWRTVFAFFERGWPIPQFYGKWPFLRLLGMQEPASVIFSC 119

Query: 395 LNLLANAYMYSKLRTEFSIKSRPMVLLWHLFALVCMNAXVW 517
           LN + +  +  K R E    S P  +L H+FA+  +N  +W
Sbjct: 120 LNFVVHLRLLRKFRREVRPDS-PCYMLTHIFAVTSLNGWIW 159


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,328,561
Number of Sequences: 53049
Number of extensions: 509568
Number of successful extensions: 1298
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)