Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24k04
         (632 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77665-1|AAC51143.1|  268|Homo sapiens RNaseP protein P30 protein.     45   3e-04
BC006991-1|AAH06991.1|  268|Homo sapiens ribonuclease P/MRP 30kD...    45   3e-04
AL590622-3|CAH72457.1|  212|Homo sapiens ribonuclease P (30kD) (...    45   3e-04
AL590622-2|CAC70100.1|  268|Homo sapiens ribonuclease P (30kD) (...    45   3e-04
AL590622-1|CAH72456.1|  254|Homo sapiens ribonuclease P (30kD) (...    45   3e-04

>U77665-1|AAC51143.1|  268|Homo sapiens RNaseP protein P30 protein.
          Length = 268

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +3

Query: 411 LNILQRITIEFSDSGIVHKLNR-SENIKKYDIIAVIPKTLQAFQYACSSMDIDII 572
           + IL R+TI  SD    + L   S   + YD++AV PKT + F  AC+ +D+D++
Sbjct: 71  IKILTRLTIIVSDPSHCNVLRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLV 125


>BC006991-1|AAH06991.1|  268|Homo sapiens ribonuclease P/MRP 30kDa
           subunit protein.
          Length = 268

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +3

Query: 411 LNILQRITIEFSDSGIVHKLNR-SENIKKYDIIAVIPKTLQAFQYACSSMDIDII 572
           + IL R+TI  SD    + L   S   + YD++AV PKT + F  AC+ +D+D++
Sbjct: 71  IKILTRLTIIVSDPSHCNVLRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLV 125


>AL590622-3|CAH72457.1|  212|Homo sapiens ribonuclease P (30kD)
           (RPP30) protein.
          Length = 212

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +3

Query: 411 LNILQRITIEFSDSGIVHKLNR-SENIKKYDIIAVIPKTLQAFQYACSSMDIDII 572
           + IL R+TI  SD    + L   S   + YD++AV PKT + F  AC+ +D+D++
Sbjct: 25  IKILTRLTIIVSDPSHCNVLRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLV 79


>AL590622-2|CAC70100.1|  268|Homo sapiens ribonuclease P (30kD)
           (RPP30) protein.
          Length = 268

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +3

Query: 411 LNILQRITIEFSDSGIVHKLNR-SENIKKYDIIAVIPKTLQAFQYACSSMDIDII 572
           + IL R+TI  SD    + L   S   + YD++AV PKT + F  AC+ +D+D++
Sbjct: 71  IKILTRLTIIVSDPSHCNVLRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLV 125


>AL590622-1|CAH72456.1|  254|Homo sapiens ribonuclease P (30kD)
           (RPP30) protein.
          Length = 254

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +3

Query: 411 LNILQRITIEFSDSGIVHKLNR-SENIKKYDIIAVIPKTLQAFQYACSSMDIDII 572
           + IL R+TI  SD    + L   S   + YD++AV PKT + F  AC+ +D+D++
Sbjct: 93  IKILTRLTIIVSDPSHCNVLRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLV 147


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,879,746
Number of Sequences: 237096
Number of extensions: 1228736
Number of successful extensions: 5398
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5398
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)