Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24k04
         (632 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075315-1|AAL68182.1|  297|Drosophila melanogaster GH06023p pro...    63   3e-10
AE014134-65|AAF51526.1|  297|Drosophila melanogaster CG11606-PA ...    63   3e-10
AY118972-1|AAM50832.1|  280|Drosophila melanogaster LD47792p pro...    30   2.3  
AE014297-137|AAF52101.1|  280|Drosophila melanogaster CG9769-PA ...    30   2.3  

>AY075315-1|AAL68182.1|  297|Drosophila melanogaster GH06023p
           protein.
          Length = 297

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
 Frame = +3

Query: 201 FCDLSISKNYDIDKLH-IIEKL---GFNTIAINTCLEEGSDEPXXXXXXGDTREIKDFVP 368
           F D SI  N D   L  ++ +L   G+ T+AI+   +    +P         +   +  P
Sbjct: 7   FYDFSIPYNKDDSVLRALLNELVETGYKTVAIDQSFDHSKKDPG--------KRGSEMFP 58

Query: 369 PPMDLPK-DNNFQTKLNILQRITIEFSDSGIVHKLNRSENIKKYDIIAVIPKTLQAFQYA 545
            P  +      FQ KL ILQRITI + D  + H ++ S N++K+++IA  PKT  A  + 
Sbjct: 59  EPHKIEHLRKEFQDKLRILQRITILYVDVNVAHAMSVSHNLRKFNLIAGQPKTDAALTHC 118

Query: 546 CSSMDIDIISFE 581
           C++ + D+I+F+
Sbjct: 119 CTAFNGDLITFD 130


>AE014134-65|AAF51526.1|  297|Drosophila melanogaster CG11606-PA
           protein.
          Length = 297

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
 Frame = +3

Query: 201 FCDLSISKNYDIDKLH-IIEKL---GFNTIAINTCLEEGSDEPXXXXXXGDTREIKDFVP 368
           F D SI  N D   L  ++ +L   G+ T+AI+   +    +P         +   +  P
Sbjct: 7   FYDFSIPYNKDDSVLRALLNELVETGYKTVAIDQSFDHSKKDPG--------KRGSEMFP 58

Query: 369 PPMDLPK-DNNFQTKLNILQRITIEFSDSGIVHKLNRSENIKKYDIIAVIPKTLQAFQYA 545
            P  +      FQ KL ILQRITI + D  + H ++ S N++K+++IA  PKT  A  + 
Sbjct: 59  EPHKIEHLRKEFQDKLRILQRITILYVDVNVAHAMSVSHNLRKFNLIAGQPKTDAALTHC 118

Query: 546 CSSMDIDIISFE 581
           C++ + D+I+F+
Sbjct: 119 CTAFNGDLITFD 130


>AY118972-1|AAM50832.1|  280|Drosophila melanogaster LD47792p
           protein.
          Length = 280

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +3

Query: 363 VPPPMDLPKDNNFQTKLNILQRITIEFSDSGIVHKLNRSENIKK--YDIIAVIP 518
           VPP +DL + +   TKL  L  + +++ D  I HK+     + +   D+I  +P
Sbjct: 183 VPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVP 236


>AE014297-137|AAF52101.1|  280|Drosophila melanogaster CG9769-PA
           protein.
          Length = 280

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +3

Query: 363 VPPPMDLPKDNNFQTKLNILQRITIEFSDSGIVHKLNRSENIKK--YDIIAVIP 518
           VPP +DL + +   TKL  L  + +++ D  I HK+     + +   D+I  +P
Sbjct: 183 VPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVP 236


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,809,971
Number of Sequences: 53049
Number of extensions: 404184
Number of successful extensions: 663
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)