Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24k02
(607 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 150 1e-37
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 114 8e-27
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 112 4e-26
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 95 9e-21
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 84 1e-17
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 69 4e-13
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 62 5e-11
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 54 2e-08
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 37 0.003
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 4.9
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 4.9
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 4.9
SPAC1851.02 |||1-acylglycerol-3-phosphate O-acyltransferase|Schi... 25 6.5
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 150 bits (364), Expect = 1e-37
Identities = 74/120 (61%), Positives = 84/120 (70%)
Frame = +2
Query: 248 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 427
+GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI
Sbjct: 21 RGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVI 80
Query: 428 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGXDTNGSQFFITTV 607
NFMIQ +SIYG RF DENFKL H G LSMANAG D+NGSQFFITTV
Sbjct: 81 PNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTV 140
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 114 bits (275), Expect = 8e-27
Identities = 59/110 (53%), Positives = 66/110 (60%)
Frame = +2
Query: 278 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 457
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 458 XXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGXDTNGSQFFITTV 607
+SIYGE+F DENF LKH G LSMANAG +TNGSQFFITTV
Sbjct: 66 TRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTV 115
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 112 bits (269), Expect = 4e-26
Identities = 64/117 (54%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Frame = +2
Query: 269 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 436
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 437 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGXDTNGSQFFITTV 607
M+Q SIYGE+FEDENF+LKH LSMANAG +TNGSQFFITTV
Sbjct: 64 MLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTV 120
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 94.7 bits (225), Expect = 9e-21
Identities = 59/121 (48%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Frame = +2
Query: 272 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVI 427
V D+ I +G I I LF VPKT ENF Q QKP G YK S FHR+I
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRII 64
Query: 428 KNFMIQXXXXXXXXXXXXRSIYGER-FEDENFKLKHYGAGWLSMANAGXDTNGSQFFITT 604
+ FMIQ +I+ R F DENF LKH G LSMANAG D+NG QFFITT
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITT 124
Query: 605 V 607
V
Sbjct: 125 V 125
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 84.2 bits (199), Expect = 1e-17
Identities = 50/101 (49%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Frame = +2
Query: 302 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 481
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGT 65
Query: 482 RSIYGERFEDE-NFKLKHYGAGWLSMANAGXDTNGSQFFIT 601
SIYG++F+DE + L H GAG LSMANAG +TN SQFFIT
Sbjct: 66 -SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFIT 105
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 69.3 bits (162), Expect = 4e-13
Identities = 45/100 (45%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +2
Query: 308 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 487
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQGGDPLGDGTGG-ES 519
Query: 488 IYGERFEDE-NFKLKHYGAGWLSMANAGXDTNGSQFFITT 604
I+ + FEDE + LKH +SMAN+G +TNGSQFFITT
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITT 559
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 62.5 bits (145), Expect = 5e-11
Identities = 43/100 (43%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = +2
Query: 302 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 481
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQGGDPSGTGRGG- 338
Query: 482 RSIYGERFEDENFK-LKHYGAGWLSMANAGXDTNGSQFFI 598
+SI+G+ F+DE LKH G +SMAN G +TNGSQFFI
Sbjct: 339 QSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFI 378
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 53.6 bits (123), Expect = 2e-08
Identities = 40/99 (40%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 308 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 487
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQ-GGDPTGTGMGGES 77
Query: 488 IYGERFEDENF-KLKHYGAGWLSMANAGXDTNGSQFFIT 601
IYGE F E +L+ G + MA + N SQFFIT
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFIT 116
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 36.7 bits (81), Expect = 0.003
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 14/116 (12%)
Frame = +2
Query: 296 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 475
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 476 XXRSIY-----GERFEDENF--KLKHYGAGWLSMANAGXDTN-------GSQFFIT 601
R ++ G RF F L H G +SM+ A + GSQF IT
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIIT 118
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -1
Query: 484 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 332
+PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 4.9
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 294 PIFMSKLTL*VTLG-PLGISSDLALAMNNKIPKAIVRVPMIKTSLVRFL 151
PIF KL + +TLG L ISS + + KA V ++ TS + FL
Sbjct: 3530 PIFQGKLDMAITLGHKLSISSAKLSTICRSVLKASVNSALL-TSWICFL 3577
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 166 FSSFPCYFYKIRFECLFFQNLRY 98
FSSF F+++ F C FF L Y
Sbjct: 11 FSSFESLFFRLFFVCSFFFPLLY 33
>SPAC1851.02 |||1-acylglycerol-3-phosphate
O-acyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 279
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 122 TFETNFVKIARKRTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKV 274
TF N+ IA+K + V I+G + ++ S +SD I K ++
Sbjct: 119 TFGPNYSVIAKKSLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRM 169
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,407,265
Number of Sequences: 5004
Number of extensions: 47322
Number of successful extensions: 132
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 266270664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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