Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24j15
(635 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.01c |pso2|snm1, SPAC56F8.17c, snm1|DNA 5' exonuclease ... 32 0.080
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 30 0.32
SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase |Schizosaccharom... 29 0.56
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.74
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 28 0.98
SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|... 28 1.3
SPBC17F3.01c |rga5|SPBC557.01|GTPase activating protein Rga5|Sch... 27 1.7
SPAC1F5.07c |hem14||protoporphyrinogen oxidase|Schizosaccharomyc... 27 3.0
SPBC21D10.08c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 26 4.0
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 23 5.1
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 26 5.2
SPBC4F6.09 |str1||siderophore-iron transporter Str1 |Schizosacch... 26 5.2
SPAC1805.16c |||purine nucleoside phosphorylase |Schizosaccharom... 25 6.9
SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subuni... 25 9.1
SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.1
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 25 9.1
SPBC17G9.04c |nup85||nucleoporin Nup85|Schizosaccharomyces pombe... 25 9.1
SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|ch... 25 9.1
>SPAC22A12.01c |pso2|snm1, SPAC56F8.17c, snm1|DNA 5' exonuclease
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 560
Score = 31.9 bits (69), Expect = 0.080
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +3
Query: 531 ISPRSI-PHHKIVAGTY-FAVDAFSYGDIPNVKHYFL 635
I+ RS+ P +K++ FAVDAF+YG I V+ YFL
Sbjct: 177 INVRSVVPFYKLMPYNIPFAVDAFAYGAIDGVEAYFL 213
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 29.9 bits (64), Expect = 0.32
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = +3
Query: 207 EDTNADQIENVASVRAMSKNSCVGDTNRRTLCKVNDR--NNESPRSVKTTSI--RREIIS 374
+D+ A+Q E + + SKNS D N ++ + + +N SP S+ + + +R +
Sbjct: 83 DDSFANQAEKPSMEQQNSKNSIKEDANEHSVNSAHSKSSSNASPESLNPSQMMSKRLSLP 142
Query: 375 PRSQ--DVKIIR-TETPHVQSAKVRNESAS 455
P SQ D + TP QS + ++S
Sbjct: 143 PMSQFTDSDFVNILRTPFAQSTPLNRNTSS 172
>SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 29.1 bits (62), Expect = 0.56
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 361 RLIDVVLTDLGDSLFLSFTLHSVLLLVSPTQEFLLIALTLATFSI 227
+L D+V+ + D L +H+VL L++P+ F L+ L L I
Sbjct: 171 QLADIVIENNSDLETLYENIHNVLPLITPSYFFTLLCLILPPLQI 215
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.7 bits (61), Expect = 0.74
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 171 LPKIVNVFSLKGEDTNADQIENVASVRAMSKNS 269
+P+I N S K TN +Q+ + S+RA S NS
Sbjct: 189 VPEITNEVSPKFTSTNDEQVYRLRSIRAGSPNS 221
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 28.3 bits (60), Expect = 0.98
Identities = 19/74 (25%), Positives = 30/74 (40%)
Frame = +3
Query: 405 TETPHVQSAKVRNESASAHWPRKGIETLNFSLPAKSKSNRTSISPRSIPHHKIVAGTYFA 584
TET H+ R ES + P +G T SLP++ + + SIP + G +
Sbjct: 702 TETKHL-----RKESTPSKQPTEGQHTRQESLPSQQTTETKHLRKESIPSKQPTEGQHAR 756
Query: 585 VDAFSYGDIPNVKH 626
++ KH
Sbjct: 757 QESLPSQQTTETKH 770
>SPBC16D10.04c |dna2||DNA replication endonuclease-helicase
Dna2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1398
Score = 27.9 bits (59), Expect = 1.3
Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
Frame = +3
Query: 210 DTNADQIENVASVRAMSKNSCVGDTNRRTLCKVNDRNNESPRSVKTTSIRREIISPR--- 380
D + D+I R S V R + K ND NNES + I I SPR
Sbjct: 514 DLSLDEIREELDARLPLLKSIV---ERYLISKKNDNNNESIHISRLLDIEESIWSPRFGL 570
Query: 381 ----SQDVKIIRTETPHVQS 428
V+++ TE P S
Sbjct: 571 KGNIDATVEVVLTEKPESSS 590
>SPBC17F3.01c |rga5|SPBC557.01|GTPase activating protein
Rga5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 27.5 bits (58), Expect = 1.7
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +3
Query: 327 SPRSVKTTSIRREIISPRSQDVKIIRTETPHVQSAKVRNESASAHWPRKGIETLNFSLPA 506
+P + +TSIR +PR+ +K R+ + H S+ + S S+++ ++ P
Sbjct: 275 APTPIASTSIRINSFNPRNGSIKRWRSFSRH--SSATYSNSPSSNFSNMKSSEVDPGSPP 332
Query: 507 KSKSNRTSISPRS 545
+ KS S+S S
Sbjct: 333 RIKSRSYSLSRSS 345
>SPAC1F5.07c |hem14||protoporphyrinogen oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 26.6 bits (56), Expect = 3.0
Identities = 17/73 (23%), Positives = 30/73 (41%)
Frame = +3
Query: 297 LCKVNDRNNESPRSVKTTSIRREIISPRSQDVKIIRTETPHVQSAKVRNESASAHWPRKG 476
L K+ + + + REI+SP + +K P +S S ++G
Sbjct: 194 LAKIEKKYGNITLGLIRALLAREILSPAEKALKAALLAEPKTAELSNSMKSTSMFAFKEG 253
Query: 477 IETLNFSLPAKSK 515
IET+ S+ + K
Sbjct: 254 IETITLSIADELK 266
>SPBC21D10.08c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 26.2 bits (55), Expect = 4.0
Identities = 24/80 (30%), Positives = 33/80 (41%)
Frame = +3
Query: 114 LNNGNFASTKLKQKSIHDFLPKIVNVFSLKGEDTNADQIENVASVRAMSKNSCVGDTNRR 293
L GN T K K+ +L + F D Q+E +VR M N + N
Sbjct: 179 LELGNKVQTLGKAKNKKHWLG-VYQSFGKASVDQIQKQLE-CYNVRMMELNK-TDENNES 235
Query: 294 TLCKVNDRNNESPRSVKTTS 353
+C+ + E RS KTTS
Sbjct: 236 AICESQASSKEDERSDKTTS 255
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 22.6 bits (46), Expect(2) = 5.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 279 DTNRRTLCKVNDRNNESPRSVKTTSIRREIISPRSQD 389
D + ND NN+SP+ +K R++ P ++D
Sbjct: 240 DLEEEDMMHQNDPNNQSPKLLKEF---RKLHEPNAED 273
Score = 21.4 bits (43), Expect(2) = 5.1
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 465 PRKGIETLNFSLPAKSKSNRTSISPR-SIP 551
P KG++ L+ K S R + PR S+P
Sbjct: 284 PHKGVDILSEVEAVKDWSKRLHLGPRASLP 313
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 25.8 bits (54), Expect = 5.2
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 279 DTNRRTLCKVNDRNNESPRSVKTTSIRREIISPRSQDVKIIRTETPHVQSAKVRNES 449
+TNR L N NE+ +SVK+ + R+ P V+ ++ + V + K+++E+
Sbjct: 320 NTNRTLLRNANLTLNEAQQSVKSLT-ERQGPRPSDNGVQDLQEKMQEVNAEKLQHEN 375
>SPBC4F6.09 |str1||siderophore-iron transporter Str1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 612
Score = 25.8 bits (54), Expect = 5.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -1
Query: 461 VGACAFISYFSRLYMRCFGSYYFDILTPRRY 369
+GAC +S+ + C+ +YY+ L Y
Sbjct: 368 IGACCAMSFLFYITFYCWDNYYYSFLQVVHY 398
>SPAC1805.16c |||purine nucleoside phosphorylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 315
Score = 25.4 bits (53), Expect = 6.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 42 YKLEKRKIIYDSWKGNKRRLLDATLNNGNFA 134
Y LE RK++YD+ K +K + T++ G +A
Sbjct: 185 YDLELRKLVYDAAKAHK---VSRTIHEGCYA 212
>SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subunit
Orc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 707
Score = 25.0 bits (52), Expect = 9.1
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +3
Query: 207 EDTNADQIENVASVRAMSKNSCVGDTNRRTLCKVNDRNNESPRSVKTTSIRREIISPRSQ 386
ED + EN+ + S + G + L V + + S + K + + S S+
Sbjct: 206 EDLLVEMEENLRPTKKKSGSRGRGRPRKYPLPNVESKESSSKVNSKDENFDLQDDSESSE 265
Query: 387 DVKIIRTETPHVQSAKVRNESAS-AHWPRK 473
D I+ +TP + + R+ S++ A P++
Sbjct: 266 DNLTIQPQTPRRRHKRSRHNSSNLASTPKR 295
>SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 773
Score = 25.0 bits (52), Expect = 9.1
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = -2
Query: 325 SLFLSFTLHSVLLLVSPTQEFLLIALTLATFSI*SAFVSSPFRLKTLTILGRKS*IDFCF 146
SLF S T LLL ++F + TL + S S F L+T +C
Sbjct: 605 SLFDSTTSREALLLAFVPEDFDSLFKTLGNLVVDSNLASVKFNLETYI---------YCL 655
Query: 145 NLVLAKFPLFNVASSN 98
++VL + VASS+
Sbjct: 656 SVVLDAMGVGGVASSS 671
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 25.0 bits (52), Expect = 9.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 525 TSISPRSIPHHKIVAGTYFAVDAFSYGDIPNVKHYFL 635
T S R+I H++ +AG Y V G +P+ YF+
Sbjct: 54 TLSSMRTIFHNEGIAGLYRGVGPMMLGYLPSWSIYFV 90
>SPBC17G9.04c |nup85||nucleoporin Nup85|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 675
Score = 25.0 bits (52), Expect = 9.1
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 171 GNHESISVSI*YSQNFHYSTWRRVIFFYSLSNCRK*FFVSLIYNLAAGQ 25
GN E I +S + Q + + + F Y +C+ +SL+Y LA G+
Sbjct: 314 GNKEVIMLSCAHWQEY----FSALAFLYGPLDCKNPEDISLLYQLATGE 358
>SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 678
Score = 25.0 bits (52), Expect = 9.1
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 165 HESISVSI*YSQNFHYSTWRRVIFFY 88
HE++ S+ Q+FHY+ +IF +
Sbjct: 292 HETLQYSVRLEQHFHYTQDPLIIFLF 317
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,733,040
Number of Sequences: 5004
Number of extensions: 58411
Number of successful extensions: 201
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 283719918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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