Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24j14
         (530 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024751-13|AAK21512.2|  488|Caenorhabditis elegans Hypothetical...    39   0.003
Z81054-7|CAB02881.1|  472|Caenorhabditis elegans Hypothetical pr...    37   0.010
Z75714-6|CAE54930.1|  532|Caenorhabditis elegans Hypothetical pr...    35   0.032
Z75714-5|CAB00065.2|  581|Caenorhabditis elegans Hypothetical pr...    35   0.032
AF098994-5|AAC67473.3|  579|Caenorhabditis elegans Hypothetical ...    35   0.032
AF098994-4|AAO21390.1|  606|Caenorhabditis elegans Hypothetical ...    35   0.032
Z78413-12|CAB01666.3|  448|Caenorhabditis elegans Hypothetical p...    33   0.17 
Z78411-5|CAB01647.3|  448|Caenorhabditis elegans Hypothetical pr...    33   0.17 
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr...    31   0.39 
AC024791-18|AAT81180.1|  438|Caenorhabditis elegans Hypothetical...    31   0.68 
AC024791-16|AAF60674.3|  468|Caenorhabditis elegans Hypothetical...    31   0.68 
AC024791-15|ABQ13056.1|  464|Caenorhabditis elegans Hypothetical...    31   0.68 
Z83122-4|CAB05602.2|  664|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AF067211-1|AAC16986.1|  455|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical pr...    28   3.6  
Z68134-1|CAA92226.2|  492|Caenorhabditis elegans Hypothetical pr...    28   4.8  
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family...    28   4.8  
AC006605-3|AAK85442.1|  933|Caenorhabditis elegans Hypothetical ...    27   6.3  
AF022969-5|AAB69891.1|   98|Caenorhabditis elegans Hypothetical ...    27   8.4  
AC006627-10|AAK85465.1|  499|Caenorhabditis elegans Hypothetical...    27   8.4  

>AC024751-13|AAK21512.2|  488|Caenorhabditis elegans Hypothetical
           protein Y18H1A.9 protein.
          Length = 488

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
 Frame = +2

Query: 305 LKQIVPTNKPKKRKVKLMNWKKYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKM 484
           L++ V  +  +++KV+  N  +YH    +  +++ L   YP + +V  IG + EGR I +
Sbjct: 104 LRKQVRLHDWREQKVQF-NLAQYHSFADVINYLNSLAITYPELVSVQPIGTTHEGRQIPL 162

Query: 485 LKISN--SDARNSAIWL 529
           +KI+N  +      IW+
Sbjct: 163 IKITNKRNGGTKRGIWV 179


>Z81054-7|CAB02881.1|  472|Caenorhabditis elegans Hypothetical
           protein F01D4.4 protein.
          Length = 472

 Score = 36.7 bits (81), Expect = 0.010
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +2

Query: 362 WKKYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNS 502
           W  YH    + A + E+    P I T+  IGQSVEGR + +++ S +
Sbjct: 37  WGHYHNQAQLEAKLGEINEKCPEITTLYEIGQSVEGRPLVVIQFSTT 83


>Z75714-6|CAE54930.1|  532|Caenorhabditis elegans Hypothetical
           protein ZC434.9b protein.
          Length = 532

 Score = 35.1 bits (77), Expect = 0.032
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +2

Query: 368 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARN 514
           +YH    I  ++ ++ER YP    V  +G + EGR I+ +KI +   RN
Sbjct: 140 EYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRN 188


>Z75714-5|CAB00065.2|  581|Caenorhabditis elegans Hypothetical
           protein ZC434.9a protein.
          Length = 581

 Score = 35.1 bits (77), Expect = 0.032
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +2

Query: 368 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARN 514
           +YH    I  ++ ++ER YP    V  +G + EGR I+ +KI +   RN
Sbjct: 140 EYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRN 188


>AF098994-5|AAC67473.3|  579|Caenorhabditis elegans Hypothetical
           protein T06A4.1a protein.
          Length = 579

 Score = 35.1 bits (77), Expect = 0.032
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = +2

Query: 362 WKKYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKIS 496
           + KY+ L  I   +  L+++YP + T+  IGQS E R + ++KI+
Sbjct: 125 YDKYNSLEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKIT 169


>AF098994-4|AAO21390.1|  606|Caenorhabditis elegans Hypothetical
           protein T06A4.1b protein.
          Length = 606

 Score = 35.1 bits (77), Expect = 0.032
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = +2

Query: 362 WKKYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKIS 496
           + KY+ L  I   +  L+++YP + T+  IGQS E R + ++KI+
Sbjct: 125 YDKYNSLEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKIT 169


>Z78413-12|CAB01666.3|  448|Caenorhabditis elegans Hypothetical
           protein F02D8.4 protein.
          Length = 448

 Score = 32.7 bits (71), Expect = 0.17
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 398 FIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWL 529
           F++ L + YP    +  IG S EGR I  ++I++  +    +W+
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWI 171


>Z78411-5|CAB01647.3|  448|Caenorhabditis elegans Hypothetical
           protein F02D8.4 protein.
          Length = 448

 Score = 32.7 bits (71), Expect = 0.17
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 398 FIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWL 529
           F++ L + YP    +  IG S EGR I  ++I++  +    +W+
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWI 171


>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
           protein F59A3.1 protein.
          Length = 1014

 Score = 31.5 bits (68), Expect = 0.39
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +2

Query: 368 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISN 499
           K H  N + A++     +YP I  +   G+SVEGR++ +L IS+
Sbjct: 77  KNHNYNEMTAWLKATRLNYPNITHLYSAGKSVEGRELWVLIISD 120


>AC024791-18|AAT81180.1|  438|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19b protein.
          Length = 438

 Score = 30.7 bits (66), Expect = 0.68
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = +2

Query: 368 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLK 490
           +Y+  +V+  +++ +  + P I  +  +G ++EGRDI  LK
Sbjct: 95  EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLK 135


>AC024791-16|AAF60674.3|  468|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19a protein.
          Length = 468

 Score = 30.7 bits (66), Expect = 0.68
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = +2

Query: 368 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLK 490
           +Y+  +V+  +++ +  + P I  +  +G ++EGRDI  LK
Sbjct: 95  EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLK 135


>AC024791-15|ABQ13056.1|  464|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19c protein.
          Length = 464

 Score = 30.7 bits (66), Expect = 0.68
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = +2

Query: 368 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLK 490
           +Y+  +V+  +++ +  + P I  +  +G ++EGRDI  LK
Sbjct: 95  EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLK 135


>Z83122-4|CAB05602.2|  664|Caenorhabditis elegans Hypothetical
           protein R11A5.7 protein.
          Length = 664

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +2

Query: 398 FIDELERDYPAICTVSVIGQSVEGRDIKMLKI-SNSDARNSAIWL 529
           ++  +E  YP I  +  IG + EG+ I+ LKI + S  +  A+W+
Sbjct: 170 YMRTIEFYYPRIAKIVRIGATHEGKPIEGLKIGARSSHKKRAVWV 214


>AF067211-1|AAC16986.1|  455|Caenorhabditis elegans Hypothetical
           protein B0205.10 protein.
          Length = 455

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 268 KENKTRHSHTKRIKTNCSNE*TKEKKSKINELEEIPQTERD 390
           K+ K + S +K  K   S +  K+KKSK       PQT  D
Sbjct: 257 KKKKNKKSKSKDKKKTASKKNKKKKKSKGESASSTPQTPND 297


>Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical
           protein W08D2.5 protein.
          Length = 1256

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 317 VPTNKPKKRKVKLMNWKKYHRLNVIYAFIDELERD 421
           +PT   + RKV  + W  Y +L   Y +ID+L  D
Sbjct: 85  IPTENGEMRKVPELRWFVYRKLE--YVWIDDLNSD 117


>Z68134-1|CAA92226.2|  492|Caenorhabditis elegans Hypothetical
           protein T27A8.1 protein.
          Length = 492

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 401 IDELERDYPAICTVSVIGQSVEGRDIKMLKIS 496
           I  L R +P +  +   GQSV+GR++ +L +S
Sbjct: 68  IHNLHRKFPNLTHIYSAGQSVQGRELWVLVVS 99


>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
           protein 3 protein.
          Length = 3343

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 194 ISEHDVDLESNSTIWTENGTQ 256
           I++ D  L +NSTIW ENG +
Sbjct: 359 ITDSDGPLGANSTIWIENGNE 379


>AC006605-3|AAK85442.1|  933|Caenorhabditis elegans Hypothetical
           protein C07H6.4 protein.
          Length = 933

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +3

Query: 138 QSQRRVLQNYQTFCERPTVFPNTM*IWNPIPLYGLKTVLKLSSERKQNQAQSYQED 305
           Q ++RV+  ++ F E   V+P    I N     GL  + K  SE + NQ    +ED
Sbjct: 634 QFKQRVMCVFRNF-EEMAVYPTDKLIHNQNVFLGLIEIGKEKSEERDNQKLEEEED 688


>AF022969-5|AAB69891.1|   98|Caenorhabditis elegans Hypothetical
           protein C29G2.2 protein.
          Length = 98

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 170 NVLRKTNGISEHDVDLESNSTIWTENGTQTKFGKKTKPGTV 292
           N+ +K NG  E D D + N+T+  E   +     + +PG +
Sbjct: 59  NMGKKVNGFEEGDDDFDENTTV-DEQDNENYVNVEKRPGKI 98


>AC006627-10|AAK85465.1|  499|Caenorhabditis elegans Hypothetical
           protein E01A2.8 protein.
          Length = 499

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 182 KTNGISEHDVDLESNSTIWTENGTQTKFGK 271
           K   ISEHD +L+SN     +N +Q  F K
Sbjct: 100 KEEKISEHDENLKSNIETERQNSSQDLFSK 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,203,221
Number of Sequences: 27780
Number of extensions: 224608
Number of successful extensions: 681
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)