Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24j07
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 31 0.52
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ... 30 1.2
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical... 30 1.2
AF025457-7|AAB70967.1| 431|Caenorhabditis elegans Hypothetical ... 29 2.8
AC199158-9|ABO33285.1| 229|Caenorhabditis elegans Hypothetical ... 29 3.7
AC199158-5|ABO33288.1| 229|Caenorhabditis elegans Hypothetical ... 29 3.7
U41553-5|AAO91694.1| 468|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF036701-2|AAB88369.2| 625|Caenorhabditis elegans Hypothetical ... 28 6.4
AC093703-4|AAY55885.1| 345|Caenorhabditis elegans Hypothetical ... 28 6.4
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 27 8.5
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 27 8.5
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +2
Query: 110 HHHHHVYEFGR*ITRPVQRLVHARRGTSKDQCRSAGLRFQLNRDALHCTERRRN*MHRME 289
HHHHH ++ +P + H R KD+ R+ G R D T + + H +
Sbjct: 1389 HHHHHHHKSKE--EKPKEAKDHKERDREKDRERNRGER---RMDHGEGTSKDHHREHHKD 1443
Query: 290 TERLDHHRFRH 322
+ HHR +H
Sbjct: 1444 HHKDHHHREQH 1454
>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 300 LITIDSDTQDQEWAVVNTVGRRQRTLSGNITSDYANLRARIIKIPLDDLKTFRITRNNQQ 479
+I+I SD D+E + ++Q ++GN A R + P+D+ K R R+N +
Sbjct: 962 IISISSDESDKEEEPSCSNTKKQAKMAGNERKTIAPARRSVGDTPIDNEKEERECRSNTK 1021
Query: 480 MQ 485
Q
Sbjct: 1022 KQ 1023
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3
Query: 243 LCIVQNADGTKCIEWRPNDLITIDSDTQDQEWAVVNTVGRRQRTLSGNITSDYANLRARI 422
L + +NA+ K L++ SD DQE + +QR ++ N + R RI
Sbjct: 904 LKVAENAENGKKASATKRRLVSSSSDESDQESRSTRSTTNKQRKIAEN-EKRASTPRVRI 962
Query: 423 IKIPLDD 443
I I D+
Sbjct: 963 ISISSDE 969
>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 300 LITIDSDTQDQEWAVVNTVGRRQRTLSGNITSDYANLRARIIKIPLDDLKTFRITRNNQQ 479
+I+I SD D+E + ++Q ++GN A R + P+D+ K R R+N +
Sbjct: 962 IISISSDESDKEEEPSCSNTKKQAKMAGNERKTIAPARRSVGDTPIDNEKEERECRSNTK 1021
Query: 480 MQ 485
Q
Sbjct: 1022 KQ 1023
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3
Query: 243 LCIVQNADGTKCIEWRPNDLITIDSDTQDQEWAVVNTVGRRQRTLSGNITSDYANLRARI 422
L + +NA+ K L++ SD DQE + +QR ++ N + R RI
Sbjct: 904 LKVAENAENGKKASATKRRLVSSSSDESDQESRSTRSTTNKQRKIAEN-EKRASTPRVRI 962
Query: 423 IKIPLDD 443
I I D+
Sbjct: 963 ISISSDE 969
>AF025457-7|AAB70967.1| 431|Caenorhabditis elegans Hypothetical
protein C08E3.8 protein.
Length = 431
Score = 29.1 bits (62), Expect = 2.8
Identities = 27/107 (25%), Positives = 44/107 (41%)
Frame = +3
Query: 279 IEWRPNDLITIDSDTQDQEWAVVNTVGRRQRTLSGNITSDYANLRARIIKIPLDDLKTFR 458
I++RPND Q+ T GRR RT + ++ I++ + DLK
Sbjct: 136 IKYRPNDTAQYSPFRQEPTC----TCGRRIRTSDEDNRKEFFVTDEDYIELGVKDLKLIM 191
Query: 459 ITRNNQQMQFSTKPGVWQNTFYFQHGNAEIFVAYLKNHLKTAKTRHD 599
+N Q +F G Q+T AEI K+ +T + ++
Sbjct: 192 ENQNVQLKKFQFSNGSNQDTQKKFIDRAEIAFKSAKSSTRTVEAHYN 238
>AC199158-9|ABO33285.1| 229|Caenorhabditis elegans Hypothetical
protein AC8.12 protein.
Length = 229
Score = 28.7 bits (61), Expect = 3.7
Identities = 25/102 (24%), Positives = 43/102 (42%)
Frame = +3
Query: 162 KDLFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGTKCIEWRPNDLITIDSDTQDQEWA 341
K L+ + V+ T RP+ D N + L + C + PN+ + ++
Sbjct: 77 KSLYARYSVINSTQYVRPIIDLNKVERLKPLMAR--MLCQLYMPNNAVHEAFSATSKDGI 134
Query: 342 VVNTVGRRQRTLSGNITSDYANLRARIIKIPLDDLKTFRITR 467
VV+ R T G +R+R+IK P +DL ++R
Sbjct: 135 VVSQQQLRDLTRRG---CPDTLIRSRVIKHPTNDLTARDVSR 173
>AC199158-5|ABO33288.1| 229|Caenorhabditis elegans Hypothetical
protein AC8.7 protein.
Length = 229
Score = 28.7 bits (61), Expect = 3.7
Identities = 25/102 (24%), Positives = 43/102 (42%)
Frame = +3
Query: 162 KDLFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGTKCIEWRPNDLITIDSDTQDQEWA 341
K L+ + V+ T RP+ D N + L + C + PN+ + ++
Sbjct: 77 KSLYARYSVINSTQYVRPIIDLNKVERLKPLMAR--MLCQLYMPNNAVHEAFSATSKDGI 134
Query: 342 VVNTVGRRQRTLSGNITSDYANLRARIIKIPLDDLKTFRITR 467
VV+ R T G +R+R+IK P +DL ++R
Sbjct: 135 VVSQQQLRDLTRRG---CPDTLIRSRVIKHPTNDLTARDVSR 173
>U41553-5|AAO91694.1| 468|Caenorhabditis elegans Hypothetical
protein ZK1193.5a protein.
Length = 468
Score = 27.9 bits (59), Expect = 6.4
Identities = 22/79 (27%), Positives = 39/79 (49%)
Frame = +3
Query: 141 DELHDQYKDLFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGTKCIEWRPNDLITIDSD 320
D + + +KD+ + V+LK + +P +D NS+ + V+N + PN L +D+
Sbjct: 82 DTVENLFKDISSH--VVLKI-LSKPSTDSNSVQCISEVKNKLLKAAVNKNPNVLTNVDN- 137
Query: 321 TQDQEWAVVNTVGRRQRTL 377
Q V+NT+ TL
Sbjct: 138 --QQVKDVINTIIAGDETL 154
>AF036701-2|AAB88369.2| 625|Caenorhabditis elegans Hypothetical
protein ZC416.6 protein.
Length = 625
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = +3
Query: 519 FYFQH--GNAEIFVAYLKNHLKT 581
FY + G +EIF AYLK++LKT
Sbjct: 397 FYLEQKLGGSEIFEAYLKDYLKT 419
>AC093703-4|AAY55885.1| 345|Caenorhabditis elegans Hypothetical
protein Y20F4.8 protein.
Length = 345
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 478 KCSSRRNRESGRIRSISNMETPRYSWPI*RI 570
K +SR E G++ + PRY+WP+ RI
Sbjct: 150 KATSRLKPEIGQVVLVFQKLLPRYAWPMARI 180
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical
protein C48B4.4c protein.
Length = 1704
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/51 (23%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +3
Query: 72 VVIVCILAGDCIVIIIIMS--TSSGDELHDQYKDLFTQDGVLLKTSVGRPV 218
++I C+L G + +++ + TSS + ++D ++ T + V L+++ +P+
Sbjct: 29 LIIPCLLLGPLVYLVVKNADHTSSPENIYDNFQVKGTVEDVFLESNFIKPI 79
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical
protein C48B4.4b protein.
Length = 1691
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/51 (23%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +3
Query: 72 VVIVCILAGDCIVIIIIMS--TSSGDELHDQYKDLFTQDGVLLKTSVGRPV 218
++I C+L G + +++ + TSS + ++D ++ T + V L+++ +P+
Sbjct: 29 LIIPCLLLGPLVYLVVKNADHTSSPENIYDNFQVKGTVEDVFLESNFIKPI 79
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical
protein C48B4.4a protein.
Length = 1689
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/51 (23%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +3
Query: 72 VVIVCILAGDCIVIIIIMS--TSSGDELHDQYKDLFTQDGVLLKTSVGRPV 218
++I C+L G + +++ + TSS + ++D ++ T + V L+++ +P+
Sbjct: 29 LIIPCLLLGPLVYLVVKNADHTSSPENIYDNFQVKGTVEDVFLESNFIKPI 79
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/51 (23%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +3
Query: 72 VVIVCILAGDCIVIIIIMS--TSSGDELHDQYKDLFTQDGVLLKTSVGRPV 218
++I C+L G + +++ + TSS + ++D ++ T + V L+++ +P+
Sbjct: 29 LIIPCLLLGPLVYLVVKNADHTSSPENIYDNFQVKGTVEDVFLESNFIKPI 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,123,113
Number of Sequences: 27780
Number of extensions: 330474
Number of successful extensions: 1066
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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