Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24j05
         (520 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical pr...    31   0.49 
L23651-14|ABN43091.1|  181|Caenorhabditis elegans Hypothetical p...    28   3.5  
AC199169-2|ABO33254.1|  319|Caenorhabditis elegans Hypothetical ...    28   4.6  
Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical pr...    27   6.1  

>Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical
           protein B0395.2 protein.
          Length = 467

 Score = 31.1 bits (67), Expect = 0.49
 Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = -2

Query: 495 CPVFICRELSKKSKSVHV-SFNLFTLYACAVVMFLNKKSTEPMVLILHVRKFDSLNFGS 322
           CP FI R+   +++   + +  L+ L   AV+ F+N   T+ +   LHV+ + SL+F +
Sbjct: 217 CPSFIYRDSYPRTEKRDMKAAGLYFLECLAVIEFVNLTFTQWVFPWLHVQDYTSLSFST 275


>L23651-14|ABN43091.1|  181|Caenorhabditis elegans Hypothetical
           protein C29E4.15 protein.
          Length = 181

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -2

Query: 213 FIIIFSQLYSTFSHLFNTMLNFKKLFNSSQLIFSLCL*MNTRR 85
           FI++F  +  +  H+F  +LNF  +  SS ++++    M T +
Sbjct: 132 FILLFPMMRLSEMHIFVLLLNFIHILVSSYIVYAFWYFMKTEK 174


>AC199169-2|ABO33254.1|  319|Caenorhabditis elegans Hypothetical
           protein F38A1.15 protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -3

Query: 512 QLSQKTAPYSYAESFRRKVN-QYT*ALIYL 426
           ++  + +PY+Y E+F+  VN  YT A IYL
Sbjct: 231 KVQTEKSPYTYGETFKIYVNSSYTEAFIYL 260


>Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical
           protein T19C4.2 protein.
          Length = 313

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -2

Query: 204 IFSQLYSTFSHLFNTMLNFKKLFNSSQLIFSLCL*MNTRRSTTYVNR 64
           +F +L+  +S +    +N     N+SQL +S C     R   T+V R
Sbjct: 117 LFERLWIKYSFILIFAINLLPFINTSQLFYSTCQ-FGNRSDDTFVLR 162


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,491,950
Number of Sequences: 27780
Number of extensions: 224447
Number of successful extensions: 527
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)