Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24j03
         (457 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024799-4|AAK72318.1|  536|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z81067-5|CAD92378.1|  965|Caenorhabditis elegans Hypothetical pr...    28   2.8  
U61947-10|AAB03132.1|  932|Caenorhabditis elegans Kinesin-like p...    28   3.7  
AY211948-1|AAO34669.1|  932|Caenorhabditis elegans kinesin-like ...    28   3.7  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   3.7  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   3.7  
AB033538-1|BAB19356.2|  930|Caenorhabditis elegans kinesin like ...    28   3.7  
Z37139-5|CAA85490.1|  558|Caenorhabditis elegans Hypothetical pr...    27   4.9  
AL132862-5|CAB70227.1|  419|Caenorhabditis elegans Hypothetical ...    27   4.9  
AL132862-4|CAB60533.1|  420|Caenorhabditis elegans Hypothetical ...    27   4.9  
AF016442-1|AAB65918.1|  340|Caenorhabditis elegans Hypothetical ...    27   4.9  
Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z82260-1|CAB05140.1|  332|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U40797-3|AAB37550.2|  238|Caenorhabditis elegans Saposin-like pr...    27   8.6  
U40797-2|AAB37549.2|  429|Caenorhabditis elegans Saposin-like pr...    27   8.6  
AF125964-3|ABA03110.1|  805|Caenorhabditis elegans Hypothetical ...    27   8.6  
AF047655-2|ABD63245.1|  805|Caenorhabditis elegans Hypothetical ...    27   8.6  
AF025465-10|AAB71023.1|  805|Caenorhabditis elegans Hypothetical...    27   8.6  
AF016422-2|AAG24174.1|  805|Caenorhabditis elegans Hypothetical ...    27   8.6  
AC024831-3|ABD63213.1|  805|Caenorhabditis elegans Hypothetical ...    27   8.6  

>AC024799-4|AAK72318.1|  536|Caenorhabditis elegans Hypothetical
           protein Y49C4A.8a protein.
          Length = 536

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -2

Query: 456 DIHFIEVMFEISNSVINANTVRFIYNFYRLSFIRKNNSVN 337
           DI+ +  +F I  S I   T+RF+Y F R  FI   +  N
Sbjct: 497 DIYTLFALFYIFVSTIIIVTIRFVYKFTRKHFILVKSKEN 536


>Z81067-5|CAD92378.1|  965|Caenorhabditis elegans Hypothetical
           protein F23A7.7 protein.
          Length = 965

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 432 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 304
           FE     I    V  IYN   +S +RK +++ ++   + FRLH
Sbjct: 597 FEYFYHTIQRTLVPEIYNGIGMSIMRKMSALQEIKAEVAFRLH 639


>U61947-10|AAB03132.1|  932|Caenorhabditis elegans Kinesin-like
           protein protein 18 protein.
          Length = 932

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 261 PSESLFVGGN-TKINSATGSKDYHI 332
           PSESLFVGG    I +  GSK Y +
Sbjct: 20  PSESLFVGGRVVTIETDNGSKRYEL 44


>AY211948-1|AAO34669.1|  932|Caenorhabditis elegans kinesin-like
           protein-18 protein.
          Length = 932

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 261 PSESLFVGGN-TKINSATGSKDYHI 332
           PSESLFVGG    I +  GSK Y +
Sbjct: 20  PSESLFVGGRVVTIETDNGSKRYEL 44


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
 Frame = +1

Query: 49  LVVKCDQEGDNTCKILCNALATA----TKAKGPEILCSRLKDVNELKLSAFYKTCDKPWS 216
           L+V  D E   T   + N L +A    T ++     C RLKD+ E KLS  +    K  +
Sbjct: 701 LIVSLDHEFRETVSCVNNCLESARTALTNSQRTVTECDRLKDIFEEKLSGGFVKDQKRQA 760

Query: 217 YANMTAEAPLCCENSQVKVCSS 282
               T  +      S  K  S+
Sbjct: 761 DNKKTTTSAAATSGSSAKSVSN 782


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
 Frame = +1

Query: 49  LVVKCDQEGDNTCKILCNALATA----TKAKGPEILCSRLKDVNELKLSAFYKTCDKPWS 216
           L+V  D E   T   + N L +A    T ++     C RLKD+ E KLS  +    K  +
Sbjct: 701 LIVSLDHEFRETVSCVNNCLESARTALTNSQRTVTECDRLKDIFEEKLSGGFVKDQKRQA 760

Query: 217 YANMTAEAPLCCENSQVKVCSS 282
               T  +      S  K  S+
Sbjct: 761 DNKKTTTSAAATSGSSAKSVSN 782


>AB033538-1|BAB19356.2|  930|Caenorhabditis elegans kinesin like
           protein KLP-18 protein.
          Length = 930

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 261 PSESLFVGGN-TKINSATGSKDYHI 332
           PSESLFVGG    I +  GSK Y +
Sbjct: 18  PSESLFVGGRVVTIETDNGSKRYEL 42


>Z37139-5|CAA85490.1|  558|Caenorhabditis elegans Hypothetical
           protein C14B1.9 protein.
          Length = 558

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = +1

Query: 94  LCNALATATKAKGPEILCSRLKDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENSQVKV 273
           L N  A    AK PE + +  +D+ E    A    CDK +  A   A   +C +N + KV
Sbjct: 68  LDNIGALFDAAKNPETMKAMCRDMTEASKCATAAGCDKIFIGAISNAFQFVCMDNLE-KV 126

Query: 274 CSSVVTLK 297
            S +  ++
Sbjct: 127 SSQIACIQ 134


>AL132862-5|CAB70227.1|  419|Caenorhabditis elegans Hypothetical
           protein Y73F8A.9 protein.
          Length = 419

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +1

Query: 145 CSRLKDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENSQVKVC--SSVVTLKSTVQ 309
           C     +NE + S+  +TC     Y  + A AP+ C+ S +  C  S V     TVQ
Sbjct: 94  CQFAPSMNECQ-SSCQQTCQTSSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQ 149


>AL132862-4|CAB60533.1|  420|Caenorhabditis elegans Hypothetical
           protein Y73F8A.8 protein.
          Length = 420

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +1

Query: 145 CSRLKDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENSQVKVC--SSVVTLKSTVQ 309
           C     +NE + S+  +TC     Y  + A AP+ C+ S +  C  S V     TVQ
Sbjct: 95  CQFAPSMNECQ-SSCQQTCQTSSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQ 150


>AF016442-1|AAB65918.1|  340|Caenorhabditis elegans Hypothetical
           protein K12B6.3 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 213 ELRKHDCRSPTLLRKFPSESLFVGGNTKIN 302
           E R HDC+  T LRKF    L   G  K++
Sbjct: 137 ETRTHDCKDLTRLRKFFEAVLAYTGYAKVS 166


>Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical
           protein K02B7.1 protein.
          Length = 742

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 432 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 304
           FE     I    V  IYN   +S +RK +++ ++     FRLH
Sbjct: 520 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 562


>Z82260-1|CAB05140.1|  332|Caenorhabditis elegans Hypothetical
           protein C32H11.2 protein.
          Length = 332

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -3

Query: 395 FVLFIIFIDFHLFVKITLLINYMVVFAS--GCTVDFSVTTDEQTF 267
           FV  IIF+   +   IT +++Y++ F +   C V F  +T+   F
Sbjct: 101 FVFLIIFLSMCMLYYITQVLHYLISFLAIRKCFVYFFPSTERTIF 145


>U40797-3|AAB37550.2|  238|Caenorhabditis elegans Saposin-like
           protein family protein10, isoform a protein.
          Length = 238

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +1

Query: 127 KGPEILCSRLKDVNELKLSAFYKTCDKPWSYANMTAEAP-LCCENSQ--VKVCSSVVTLK 297
           K P  +C+RL   +  K+ +F +   +    A  T +AP + C+  Q  VK   +VV  K
Sbjct: 97  KNPHAVCTRLHICSNKKIDSFRRILLEFAKRAQKTFDAPAIVCDECQFVVKELKTVVEDK 156

Query: 298 STVQPEAK 321
            + Q EA+
Sbjct: 157 KS-QAEAR 163


>U40797-2|AAB37549.2|  429|Caenorhabditis elegans Saposin-like
           protein family protein10, isoform b protein.
          Length = 429

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +1

Query: 127 KGPEILCSRLKDVNELKLSAFYKTCDKPWSYANMTAEAP-LCCENSQ--VKVCSSVVTLK 297
           K P  +C+RL   +  K+ +F +   +    A  T +AP + C+  Q  VK   +VV  K
Sbjct: 97  KNPHAVCTRLHICSNKKIDSFRRILLEFAKRAQKTFDAPAIVCDECQFVVKELKTVVEDK 156

Query: 298 STVQPEAK 321
            + Q EA+
Sbjct: 157 KS-QAEAR 163


>AF125964-3|ABA03110.1|  805|Caenorhabditis elegans Hypothetical
           protein W03G1.4 protein.
          Length = 805

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 432 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 304
           FE     I    V  IYN   +S +RK +++ ++     FRLH
Sbjct: 583 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 625


>AF047655-2|ABD63245.1|  805|Caenorhabditis elegans Hypothetical
           protein C17B7.7 protein.
          Length = 805

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 432 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 304
           FE     I    V  IYN   +S +RK +++ ++     FRLH
Sbjct: 583 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 625


>AF025465-10|AAB71023.1|  805|Caenorhabditis elegans Hypothetical
           protein K02E7.3 protein.
          Length = 805

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 432 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 304
           FE     I    V  IYN   +S +RK +++ ++     FRLH
Sbjct: 583 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 625


>AF016422-2|AAG24174.1|  805|Caenorhabditis elegans Hypothetical
           protein R09E12.6 protein.
          Length = 805

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 432 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 304
           FE     I    V  IYN   +S +RK +++ ++     FRLH
Sbjct: 583 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 625


>AC024831-3|ABD63213.1|  805|Caenorhabditis elegans Hypothetical
           protein Y55F3C.6 protein.
          Length = 805

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 432 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 304
           FE     I    V  IYN   +S +RK +++ ++     FRLH
Sbjct: 583 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 625


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,610,663
Number of Sequences: 27780
Number of extensions: 176668
Number of successful extensions: 508
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)