Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24i22
         (561 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.8  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              23   2.8  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   3.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   6.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   8.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.5  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 548 WVIEESCFNEQRLAISMHSSEHSW 477
           WV      NEQR  ++MH +  S+
Sbjct: 93  WVAGAQRGNEQRCTVTMHGTVQSY 116



 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 246 PGTTVLDTETGYCYDVD 296
           PGT +  T  GYC D++
Sbjct: 314 PGTGINVTLKGYCIDME 330


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 488 EHSWYIGNKYIFYFEFMLLDLFG 420
           +H+W +GN+Y +      L   G
Sbjct: 19  QHNWQVGNEYTYLVRSRTLTSLG 41


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 147  SPEPPSSPGRHRRKNHYAISN 85
            SPEPP  P R+  +N+ + ++
Sbjct: 1856 SPEPPPPPPRNHDQNNSSFND 1876


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 276 RFQCPEPLFRDS 241
           RF+CPE LF+ S
Sbjct: 29  RFRCPEALFQPS 40


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 299 LSNETWTLGPKSLLQWFSL 355
           L+  TW LGP     W SL
Sbjct: 99  LTGGTWELGPMLCDSWVSL 117


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 150 CSPEPPSSPG 121
           C+P PP  PG
Sbjct: 394 CTPSPPRGPG 403


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 252 FRDSRTWRI 226
           FR+SR+WRI
Sbjct: 213 FRNSRSWRI 221


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 250 PGQSHLENPQIVPTSTSSGCSQVLRALQ 167
           PG    +NP  +  S +SG  Q+ + LQ
Sbjct: 52  PGAPPSQNPSQMMISPASGIHQMQQLLQ 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,535
Number of Sequences: 438
Number of extensions: 3709
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)