Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24i15
(561 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065273-1|AAH65273.1| 138|Homo sapiens mitochondrial ribosomal... 89 7e-18
BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein pr... 30 6.4
BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe... 30 6.4
AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe... 30 6.4
AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein. 30 6.4
AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint p... 30 6.4
AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint p... 30 6.4
AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint p... 30 6.4
AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein. 30 6.4
AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein. 30 6.4
AF098533-1|AAC97950.1| 505|Homo sapiens RAD17 isoform 3 protein. 30 6.4
AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein prot... 30 6.4
AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint p... 30 6.4
>BC065273-1|AAH65273.1| 138|Homo sapiens mitochondrial ribosomal
protein L54 protein.
Length = 138
Score = 89.4 bits (212), Expect = 7e-18
Identities = 37/76 (48%), Positives = 53/76 (69%)
Frame = +1
Query: 331 KEMPVETDPHKLVNYVCGSNIYTTGEDVKIKPDSEYPEWLWSLNTGAAPRIEDLDPETKQ 510
K+ V TDP +L Y G NIY G+DV +KPD+EYPEWL+ +N G +E+LDPE+++
Sbjct: 57 KDPDVCTDPVQLTTYAMGVNIYKEGQDVPLKPDAEYPEWLFEMNLGPPKTLEELDPESRE 116
Query: 511 YWIRVRAAGMRRNNKL 558
YW R+R + R+N+L
Sbjct: 117 YWRRLRKQNIWRHNRL 132
>BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein
protein.
Length = 670
Score = 29.9 bits (64), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 1 DFFSVYYFQNYLKFFLNIVKLQFIARFLLYLNI 99
D F++Y QNY+ FF+ I + + FL + +I
Sbjct: 436 DLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI 468
>BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 29.9 bits (64), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 1 DFFSVYYFQNYLKFFLNIVKLQFIARFLLYLNI 99
D F++Y QNY+ FF+ I + + FL + +I
Sbjct: 436 DLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI 468
>AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 29.9 bits (64), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 1 DFFSVYYFQNYLKFFLNIVKLQFIARFLLYLNI 99
D F++Y QNY+ FF+ I + + FL + +I
Sbjct: 436 DLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI 468
>AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein.
Length = 670
Score = 29.9 bits (64), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 1 DFFSVYYFQNYLKFFLNIVKLQFIARFLLYLNI 99
D F++Y QNY+ FF+ I + + FL + +I
Sbjct: 436 DLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI 468
>AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 29.9 bits (64), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 1 DFFSVYYFQNYLKFFLNIVKLQFIARFLLYLNI 99
D F++Y QNY+ FF+ I + + FL + +I
Sbjct: 436 DLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI 468
>AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 29.9 bits (64), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 1 DFFSVYYFQNYLKFFLNIVKLQFIARFLLYLNI 99
D F++Y QNY+ FF+ I + + FL + +I
Sbjct: 436 DLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI 468
>AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 29.9 bits (64), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 1 DFFSVYYFQNYLKFFLNIVKLQFIARFLLYLNI 99
D F++Y QNY+ FF+ I + + FL + +I
Sbjct: 436 DLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI 468
>AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein.
Length = 670
Score = 29.9 bits (64), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 1 DFFSVYYFQNYLKFFLNIVKLQFIARFLLYLNI 99
D F++Y QNY+ FF+ I + + FL + +I
Sbjct: 436 DLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI 468
>AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein.
Length = 584
Score = 29.9 bits (64), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 1 DFFSVYYFQNYLKFFLNIVKLQFIARFLLYLNI 99
D F++Y QNY+ FF+ I + + FL + +I
Sbjct: 350 DLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI 382
>AF098533-1|AAC97950.1| 505|Homo sapiens RAD17 isoform 3 protein.
Length = 505
Score = 29.9 bits (64), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 1 DFFSVYYFQNYLKFFLNIVKLQFIARFLLYLNI 99
D F++Y QNY+ FF+ I + + FL + +I
Sbjct: 271 DLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI 303
>AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein
protein.
Length = 670
Score = 29.9 bits (64), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 1 DFFSVYYFQNYLKFFLNIVKLQFIARFLLYLNI 99
D F++Y QNY+ FF+ I + + FL + +I
Sbjct: 436 DLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI 468
>AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint
protein RAD17 protein.
Length = 670
Score = 29.9 bits (64), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 1 DFFSVYYFQNYLKFFLNIVKLQFIARFLLYLNI 99
D F++Y QNY+ FF+ I + + FL + +I
Sbjct: 436 DLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI 468
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,445,666
Number of Sequences: 237096
Number of extensions: 2108032
Number of successful extensions: 4559
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4559
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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