Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24i14
(613 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processi... 166 5e-41
BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processi... 166 5e-41
BC107801-1|AAI07802.1| 383|Homo sapiens PRPF38B protein protein. 166 5e-41
BC053838-1|AAH53838.1| 190|Homo sapiens PRPF38B protein protein. 166 5e-41
BC040127-1|AAH40127.1| 303|Homo sapiens PRPF38B protein protein. 166 5e-41
BC024275-1|AAH24275.1| 465|Homo sapiens Unknown (protein for IM... 166 5e-41
BC016296-1|AAH16296.1| 474|Homo sapiens Unknown (protein for IM... 166 5e-41
BC007757-1|AAH07757.1| 465|Homo sapiens PRPF38B protein protein. 166 5e-41
AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processi... 166 5e-41
AL591719-4|CAH72068.1| 190|Homo sapiens PRP38 pre-mRNA processi... 166 5e-41
AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processi... 166 5e-41
AL160171-5|CAI12932.1| 190|Homo sapiens PRP38 pre-mRNA processi... 166 5e-41
AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens ... 164 2e-40
BC034581-1|AAH34581.1| 93|Homo sapiens PRPF38B protein protein. 93 5e-19
AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processi... 57 4e-08
AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processi... 57 4e-08
>BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 166 bits (404), Expect = 5e-41
Identities = 78/133 (58%), Positives = 91/133 (68%)
Frame = +1
Query: 214 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 393
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 394 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 573
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 574 YIRALGFMYIRYT 612
YIRALGFMYIRYT
Sbjct: 156 YIRALGFMYIRYT 168
>BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 166 bits (404), Expect = 5e-41
Identities = 78/133 (58%), Positives = 91/133 (68%)
Frame = +1
Query: 214 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 393
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 394 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 573
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 574 YIRALGFMYIRYT 612
YIRALGFMYIRYT
Sbjct: 156 YIRALGFMYIRYT 168
>BC107801-1|AAI07802.1| 383|Homo sapiens PRPF38B protein protein.
Length = 383
Score = 166 bits (404), Expect = 5e-41
Identities = 78/133 (58%), Positives = 91/133 (68%)
Frame = +1
Query: 214 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 393
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 394 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 573
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 574 YIRALGFMYIRYT 612
YIRALGFMYIRYT
Sbjct: 156 YIRALGFMYIRYT 168
>BC053838-1|AAH53838.1| 190|Homo sapiens PRPF38B protein protein.
Length = 190
Score = 166 bits (404), Expect = 5e-41
Identities = 78/133 (58%), Positives = 91/133 (68%)
Frame = +1
Query: 214 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 393
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 394 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 573
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 574 YIRALGFMYIRYT 612
YIRALGFMYIRYT
Sbjct: 156 YIRALGFMYIRYT 168
>BC040127-1|AAH40127.1| 303|Homo sapiens PRPF38B protein protein.
Length = 303
Score = 166 bits (404), Expect = 5e-41
Identities = 78/133 (58%), Positives = 91/133 (68%)
Frame = +1
Query: 214 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 393
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 394 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 573
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 574 YIRALGFMYIRYT 612
YIRALGFMYIRYT
Sbjct: 156 YIRALGFMYIRYT 168
>BC024275-1|AAH24275.1| 465|Homo sapiens Unknown (protein for
IMAGE:4122390) protein.
Length = 465
Score = 166 bits (404), Expect = 5e-41
Identities = 78/133 (58%), Positives = 91/133 (68%)
Frame = +1
Query: 214 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 393
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 394 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 573
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 574 YIRALGFMYIRYT 612
YIRALGFMYIRYT
Sbjct: 156 YIRALGFMYIRYT 168
>BC016296-1|AAH16296.1| 474|Homo sapiens Unknown (protein for
IMAGE:3538108) protein.
Length = 474
Score = 166 bits (404), Expect = 5e-41
Identities = 78/133 (58%), Positives = 91/133 (68%)
Frame = +1
Query: 214 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 393
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 394 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 573
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 574 YIRALGFMYIRYT 612
YIRALGFMYIRYT
Sbjct: 156 YIRALGFMYIRYT 168
>BC007757-1|AAH07757.1| 465|Homo sapiens PRPF38B protein protein.
Length = 465
Score = 166 bits (404), Expect = 5e-41
Identities = 78/133 (58%), Positives = 91/133 (68%)
Frame = +1
Query: 214 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 393
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 394 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 573
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 574 YIRALGFMYIRYT 612
YIRALGFMYIRYT
Sbjct: 156 YIRALGFMYIRYT 168
>AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 166 bits (404), Expect = 5e-41
Identities = 78/133 (58%), Positives = 91/133 (68%)
Frame = +1
Query: 214 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 393
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 394 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 573
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 574 YIRALGFMYIRYT 612
YIRALGFMYIRYT
Sbjct: 156 YIRALGFMYIRYT 168
>AL591719-4|CAH72068.1| 190|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 190
Score = 166 bits (404), Expect = 5e-41
Identities = 78/133 (58%), Positives = 91/133 (68%)
Frame = +1
Query: 214 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 393
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 394 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 573
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 574 YIRALGFMYIRYT 612
YIRALGFMYIRYT
Sbjct: 156 YIRALGFMYIRYT 168
>AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 166 bits (404), Expect = 5e-41
Identities = 78/133 (58%), Positives = 91/133 (68%)
Frame = +1
Query: 214 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 393
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 394 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 573
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 574 YIRALGFMYIRYT 612
YIRALGFMYIRYT
Sbjct: 156 YIRALGFMYIRYT 168
>AL160171-5|CAI12932.1| 190|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 190
Score = 166 bits (404), Expect = 5e-41
Identities = 78/133 (58%), Positives = 91/133 (68%)
Frame = +1
Query: 214 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 393
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 394 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 573
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 574 YIRALGFMYIRYT 612
YIRALGFMYIRYT
Sbjct: 156 YIRALGFMYIRYT 168
>AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens
cDNA FLJ10330 fis, clone NT2RM2000624, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 546
Score = 164 bits (399), Expect = 2e-40
Identities = 77/133 (57%), Positives = 91/133 (68%)
Frame = +1
Query: 214 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 393
K + +GKQ NVLP+WG+E+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGSEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 394 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 573
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 574 YIRALGFMYIRYT 612
YIRALGFMYIRYT
Sbjct: 156 YIRALGFMYIRYT 168
>BC034581-1|AAH34581.1| 93|Homo sapiens PRPF38B protein protein.
Length = 93
Score = 93.5 bits (222), Expect = 5e-19
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = +1
Query: 214 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQ 384
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFK 92
>AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 57.2 bits (132), Expect = 4e-08
Identities = 27/43 (62%), Positives = 28/43 (65%)
Frame = +1
Query: 484 STAFCXXXXXXXXXXXXXQVNGLLQHTDSPYIRALGFMYIRYT 612
STAFC QV GL+ HTDSPYIRALGFMYIRYT
Sbjct: 15 STAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYT 57
>AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 57.2 bits (132), Expect = 4e-08
Identities = 27/43 (62%), Positives = 28/43 (65%)
Frame = +1
Query: 484 STAFCXXXXXXXXXXXXXQVNGLLQHTDSPYIRALGFMYIRYT 612
STAFC QV GL+ HTDSPYIRALGFMYIRYT
Sbjct: 15 STAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYT 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,465,266
Number of Sequences: 237096
Number of extensions: 1435364
Number of successful extensions: 2931
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2918
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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